BLASTX nr result

ID: Coptis24_contig00029051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029051
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309638.1| predicted protein [Populus trichocarpa] gi|2...    96   3e-18
ref|XP_002271792.1| PREDICTED: 14 kDa proline-rich protein DC2.1...    96   3e-18
dbj|BAK05563.1| predicted protein [Hordeum vulgare subsp. vulgare]     96   4e-18
ref|XP_002270769.1| PREDICTED: 14 kDa proline-rich protein DC2.1...    95   5e-18
ref|XP_002271871.1| PREDICTED: 14 kDa proline-rich protein DC2.1...    94   1e-17

>ref|XP_002309638.1| predicted protein [Populus trichocarpa] gi|222855614|gb|EEE93161.1|
           predicted protein [Populus trichocarpa]
          Length = 125

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 47/86 (54%), Positives = 61/86 (70%), Gaps = 4/86 (4%)
 Frame = -2

Query: 247 TQPTCRIEVLQLGVCLNFLGGVVV---SPPYP-CCTLMEGLADFDAAVCLCLAIKSNVMG 80
           T PTC  + L+LGVC + LG V V   +PPY  CC+L+EGLAD +AA CLC AIK+NV+G
Sbjct: 40  TAPTCPKDTLKLGVCADLLGPVNVVAGTPPYSKCCSLLEGLADMEAASCLCTAIKANVLG 99

Query: 79  TNLDIAQALDLIFKFCRKNLPSGFEC 2
           TNL++  AL  I   C K++P GF+C
Sbjct: 100 TNLNVPVALSAIVSACGKSIPPGFQC 125


>ref|XP_002271792.1| PREDICTED: 14 kDa proline-rich protein DC2.15 isoform 1 [Vitis
           vinifera] gi|359474359|ref|XP_003631442.1| PREDICTED: 14
           kDa proline-rich protein DC2.15 [Vitis vinifera]
           gi|147854119|emb|CAN80710.1| hypothetical protein
           VITISV_033377 [Vitis vinifera]
          Length = 135

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 46/84 (54%), Positives = 62/84 (73%), Gaps = 5/84 (5%)
 Frame = -2

Query: 238 TCRIEVLQLGVCLNFLGG----VVVSPPY-PCCTLMEGLADFDAAVCLCLAIKSNVMGTN 74
           TC  + L+LGVC++ LGG    VV +PP  PCC+L++GLAD +AAVCLC AIK+NV+G N
Sbjct: 51  TCPKDTLKLGVCVDLLGGLLGVVVGNPPKTPCCSLIQGLADLEAAVCLCTAIKANVLGIN 110

Query: 73  LDIAQALDLIFKFCRKNLPSGFEC 2
           L+I  +L L+   C K +PSGF+C
Sbjct: 111 LNIPLSLSLLLNVCSKKVPSGFQC 134


>dbj|BAK05563.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 193

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 41/83 (49%), Positives = 59/83 (71%), Gaps = 5/83 (6%)
 Frame = -2

Query: 235 CRIEVLQLGVCLNFLGGVV-----VSPPYPCCTLMEGLADFDAAVCLCLAIKSNVMGTNL 71
           C I+ L+LGVC N L G++       P  PCCTL++GLAD +AAVCLC A+K+N++G NL
Sbjct: 109 CPIDALKLGVCANVLNGLINLQLGTPPKKPCCTLIQGLADLEAAVCLCTALKANILGINL 168

Query: 70  DIAQALDLIFKFCRKNLPSGFEC 2
           ++   L L+  +C KN+P+GF+C
Sbjct: 169 NVPIDLSLLVNYCGKNVPAGFQC 191


>ref|XP_002270769.1| PREDICTED: 14 kDa proline-rich protein DC2.15 isoform 1 [Vitis
           vinifera] gi|147778026|emb|CAN65287.1| hypothetical
           protein VITISV_042739 [Vitis vinifera]
          Length = 135

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 5/84 (5%)
 Frame = -2

Query: 238 TCRIEVLQLGVCLNFLGGVV-----VSPPYPCCTLMEGLADFDAAVCLCLAIKSNVMGTN 74
           TC  + L+LGVC N LGG++       P  PCC+L++GLAD +AAVCLC AIK+NV+G N
Sbjct: 51  TCPKDTLKLGVCANLLGGLIGAVVGTPPKTPCCSLIQGLADLEAAVCLCTAIKANVLGIN 110

Query: 73  LDIAQALDLIFKFCRKNLPSGFEC 2
           L+I  +L L+   C K +P GF+C
Sbjct: 111 LNIPLSLSLLLNVCSKKVPPGFQC 134


>ref|XP_002271871.1| PREDICTED: 14 kDa proline-rich protein DC2.15 [Vitis vinifera]
          Length = 133

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 41/85 (48%), Positives = 57/85 (67%), Gaps = 5/85 (5%)
 Frame = -2

Query: 241 PTCRIEVLQLGVCLNFLGGVV-----VSPPYPCCTLMEGLADFDAAVCLCLAIKSNVMGT 77
           PTC ++ L+LGVC   L G+V          PCC+L++ L D +AAVCLC+ IK+N++G 
Sbjct: 48  PTCSVDTLKLGVCAGLLNGLVHLGVGTLANTPCCSLLDNLVDLEAAVCLCMIIKANILGI 107

Query: 76  NLDIAQALDLIFKFCRKNLPSGFEC 2
           NL    AL L+  +CRKN+PSGF+C
Sbjct: 108 NLSDPVALSLLLNYCRKNVPSGFQC 132


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