BLASTX nr result

ID: Coptis24_contig00029036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029036
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303565.1| GRAS family transcription factor [Populus tr...   205   3e-51
ref|XP_002276880.1| PREDICTED: scarecrow-like protein 28 [Vitis ...   204   5e-51
ref|XP_002299559.1| GRAS family transcription factor [Populus tr...   202   3e-50
ref|XP_004162787.1| PREDICTED: scarecrow-like protein 28-like [C...   199   3e-49
ref|XP_004148280.1| PREDICTED: LOW QUALITY PROTEIN: scarecrow-li...   199   3e-49

>ref|XP_002303565.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222840997|gb|EEE78544.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 665

 Score =  205 bits (522), Expect = 3e-51
 Identities = 99/127 (77%), Positives = 112/127 (88%)
 Frame = +2

Query: 2   KDLQETGDRLAGFAGALSLPFEFHAVVDRLEDVRLWMLHVKEKESVAVNCILQLHKMLYD 181
           ++L ETGDRLAGFA AL+LPFEFH VVDRLEDVRLWMLHVKE+E VA+NCI Q+HK LYD
Sbjct: 433 QELNETGDRLAGFAEALNLPFEFHPVVDRLEDVRLWMLHVKERECVAINCIFQMHKTLYD 492

Query: 182 ESGGVLRDFLGLIRSTNPMVVLMAEQEAKHNVPLLELRVSNSLEYYSAVFDSIDASLPLN 361
            SGG LRDFLGLIRSTNP +VL+AEQEA+HN P LE RV NSL+YYSA+FDSID+SLP N
Sbjct: 493 GSGGALRDFLGLIRSTNPTIVLLAEQEAEHNAPNLETRVCNSLKYYSAIFDSIDSSLPFN 552

Query: 362 SSVRIKI 382
           S VRIK+
Sbjct: 553 SPVRIKL 559


>ref|XP_002276880.1| PREDICTED: scarecrow-like protein 28 [Vitis vinifera]
          Length = 676

 Score =  204 bits (520), Expect = 5e-51
 Identities = 102/127 (80%), Positives = 112/127 (88%)
 Frame = +2

Query: 2   KDLQETGDRLAGFAGALSLPFEFHAVVDRLEDVRLWMLHVKEKESVAVNCILQLHKMLYD 181
           ++L ETGDRLAGFA AL+LPFEFH VVDRLEDVRLWMLHVK+KESVAVNCI QLHK LYD
Sbjct: 445 QELNETGDRLAGFAEALNLPFEFHPVVDRLEDVRLWMLHVKDKESVAVNCIFQLHKTLYD 504

Query: 182 ESGGVLRDFLGLIRSTNPMVVLMAEQEAKHNVPLLELRVSNSLEYYSAVFDSIDASLPLN 361
            SGG LRDFLGLIRSTNP +VLMAEQEA+HN   LE RVSNSL YYSA+FDSID SLPL+
Sbjct: 505 GSGGALRDFLGLIRSTNPSIVLMAEQEAEHNELSLETRVSNSLRYYSAIFDSIDYSLPLD 564

Query: 362 SSVRIKI 382
           S VR+K+
Sbjct: 565 SPVRMKV 571


>ref|XP_002299559.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222846817|gb|EEE84364.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 666

 Score =  202 bits (513), Expect = 3e-50
 Identities = 97/127 (76%), Positives = 112/127 (88%)
 Frame = +2

Query: 2   KDLQETGDRLAGFAGALSLPFEFHAVVDRLEDVRLWMLHVKEKESVAVNCILQLHKMLYD 181
           ++L ETGDRLAGFA AL+LPFEFH VVDRLEDVRLWMLHVKE+E VA+NC+ Q+HK LYD
Sbjct: 434 QELNETGDRLAGFAEALNLPFEFHPVVDRLEDVRLWMLHVKERECVAINCVFQMHKTLYD 493

Query: 182 ESGGVLRDFLGLIRSTNPMVVLMAEQEAKHNVPLLELRVSNSLEYYSAVFDSIDASLPLN 361
            SGG LRDFLGLIRSTNP +V++AEQEA+HN P LE RV NSL+YYSA+FDSID+SLP +
Sbjct: 494 GSGGALRDFLGLIRSTNPAIVIVAEQEAEHNAPNLETRVCNSLKYYSALFDSIDSSLPFD 553

Query: 362 SSVRIKI 382
           S VRIKI
Sbjct: 554 SPVRIKI 560


>ref|XP_004162787.1| PREDICTED: scarecrow-like protein 28-like [Cucumis sativus]
          Length = 658

 Score =  199 bits (505), Expect = 3e-49
 Identities = 97/127 (76%), Positives = 111/127 (87%)
 Frame = +2

Query: 2   KDLQETGDRLAGFAGALSLPFEFHAVVDRLEDVRLWMLHVKEKESVAVNCILQLHKMLYD 181
           ++L ETGDRLAGFA AL LPFEFHAVVDRLEDVRLWMLHVKE+ESV VNCILQLHK LYD
Sbjct: 414 QELNETGDRLAGFAEALRLPFEFHAVVDRLEDVRLWMLHVKEQESVGVNCILQLHKTLYD 473

Query: 182 ESGGVLRDFLGLIRSTNPMVVLMAEQEAKHNVPLLELRVSNSLEYYSAVFDSIDASLPLN 361
            +GG LRDFLGLIRSTNP +V+MAEQEA+HN P LE RV+ +L+YY+AVFDS+D SLP  
Sbjct: 474 GNGGALRDFLGLIRSTNPSIVVMAEQEAEHNEPRLETRVAATLKYYAAVFDSLDTSLPPE 533

Query: 362 SSVRIKI 382
           SS R+K+
Sbjct: 534 SSARLKV 540


>ref|XP_004148280.1| PREDICTED: LOW QUALITY PROTEIN: scarecrow-like protein 28-like
           [Cucumis sativus]
          Length = 648

 Score =  199 bits (505), Expect = 3e-49
 Identities = 97/127 (76%), Positives = 111/127 (87%)
 Frame = +2

Query: 2   KDLQETGDRLAGFAGALSLPFEFHAVVDRLEDVRLWMLHVKEKESVAVNCILQLHKMLYD 181
           ++L ETGDRLAGFA AL LPFEFHAVVDRLEDVRLWMLHVKE+ESV VNCILQLHK LYD
Sbjct: 414 QELNETGDRLAGFAEALRLPFEFHAVVDRLEDVRLWMLHVKEQESVGVNCILQLHKTLYD 473

Query: 182 ESGGVLRDFLGLIRSTNPMVVLMAEQEAKHNVPLLELRVSNSLEYYSAVFDSIDASLPLN 361
            +GG LRDFLGLIRSTNP +V+MAEQEA+HN P LE RV+ +L+YY+AVFDS+D SLP  
Sbjct: 474 GNGGALRDFLGLIRSTNPSIVVMAEQEAEHNEPRLETRVAATLKYYAAVFDSLDTSLPPE 533

Query: 362 SSVRIKI 382
           SS R+K+
Sbjct: 534 SSARLKV 540


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