BLASTX nr result
ID: Coptis24_contig00029030
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00029030 (257 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002532489.1| protein with unknown function [Ricinus commu... 89 3e-16 ref|XP_002322095.1| predicted protein [Populus trichocarpa] gi|2... 89 4e-16 ref|XP_002281955.1| PREDICTED: ras-related protein RABA6b [Vitis... 88 8e-16 gb|AAF78385.1|AC069551_18 T10O22.18 [Arabidopsis thaliana] 87 1e-15 gb|AAF97836.1|AC034107_19 Contains similarity to ras-related GTP... 87 1e-15 >ref|XP_002532489.1| protein with unknown function [Ricinus communis] gi|223527788|gb|EEF29888.1| protein with unknown function [Ricinus communis] Length = 222 Score = 89.4 bits (220), Expect = 3e-16 Identities = 43/45 (95%), Positives = 44/45 (97%) Frame = -1 Query: 137 MDDSFDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTI 3 M DS+DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTI Sbjct: 1 MGDSYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTI 45 >ref|XP_002322095.1| predicted protein [Populus trichocarpa] gi|222869091|gb|EEF06222.1| predicted protein [Populus trichocarpa] Length = 222 Score = 89.0 bits (219), Expect = 4e-16 Identities = 43/45 (95%), Positives = 44/45 (97%) Frame = -1 Query: 137 MDDSFDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTI 3 M DS+DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTI Sbjct: 1 MADSYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTI 45 >ref|XP_002281955.1| PREDICTED: ras-related protein RABA6b [Vitis vinifera] gi|297734313|emb|CBI15560.3| unnamed protein product [Vitis vinifera] Length = 218 Score = 87.8 bits (216), Expect = 8e-16 Identities = 42/43 (97%), Positives = 43/43 (100%) Frame = -1 Query: 131 DSFDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTI 3 DSFD+ECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTI Sbjct: 4 DSFDDECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTI 46 >gb|AAF78385.1|AC069551_18 T10O22.18 [Arabidopsis thaliana] Length = 356 Score = 87.0 bits (214), Expect = 1e-15 Identities = 41/44 (93%), Positives = 44/44 (100%) Frame = -1 Query: 134 DDSFDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTI 3 ++S+DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTI Sbjct: 3 EESYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTI 46 >gb|AAF97836.1|AC034107_19 Contains similarity to ras-related GTP binding protein from Oryza sativa gb|D13758 and is a member of the Ras PF|00071 family [Arabidopsis thaliana] Length = 326 Score = 87.0 bits (214), Expect = 1e-15 Identities = 41/44 (93%), Positives = 44/44 (100%) Frame = -1 Query: 134 DDSFDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTI 3 ++S+DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTI Sbjct: 3 EESYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTI 46