BLASTX nr result

ID: Coptis24_contig00029030 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029030
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532489.1| protein with unknown function [Ricinus commu...    89   3e-16
ref|XP_002322095.1| predicted protein [Populus trichocarpa] gi|2...    89   4e-16
ref|XP_002281955.1| PREDICTED: ras-related protein RABA6b [Vitis...    88   8e-16
gb|AAF78385.1|AC069551_18 T10O22.18 [Arabidopsis thaliana]             87   1e-15
gb|AAF97836.1|AC034107_19 Contains similarity to ras-related GTP...    87   1e-15

>ref|XP_002532489.1| protein with unknown function [Ricinus communis]
           gi|223527788|gb|EEF29888.1| protein with unknown
           function [Ricinus communis]
          Length = 222

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 43/45 (95%), Positives = 44/45 (97%)
 Frame = -1

Query: 137 MDDSFDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTI 3
           M DS+DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTI
Sbjct: 1   MGDSYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTI 45


>ref|XP_002322095.1| predicted protein [Populus trichocarpa] gi|222869091|gb|EEF06222.1|
           predicted protein [Populus trichocarpa]
          Length = 222

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 43/45 (95%), Positives = 44/45 (97%)
 Frame = -1

Query: 137 MDDSFDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTI 3
           M DS+DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTI
Sbjct: 1   MADSYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTI 45


>ref|XP_002281955.1| PREDICTED: ras-related protein RABA6b [Vitis vinifera]
           gi|297734313|emb|CBI15560.3| unnamed protein product
           [Vitis vinifera]
          Length = 218

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 42/43 (97%), Positives = 43/43 (100%)
 Frame = -1

Query: 131 DSFDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTI 3
           DSFD+ECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTI
Sbjct: 4   DSFDDECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTI 46


>gb|AAF78385.1|AC069551_18 T10O22.18 [Arabidopsis thaliana]
          Length = 356

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 41/44 (93%), Positives = 44/44 (100%)
 Frame = -1

Query: 134 DDSFDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTI 3
           ++S+DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTI
Sbjct: 3   EESYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTI 46


>gb|AAF97836.1|AC034107_19 Contains similarity to ras-related GTP binding protein from Oryza
           sativa gb|D13758 and is a member of the Ras PF|00071
           family [Arabidopsis thaliana]
          Length = 326

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 41/44 (93%), Positives = 44/44 (100%)
 Frame = -1

Query: 134 DDSFDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTI 3
           ++S+DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTI
Sbjct: 3   EESYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTI 46


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