BLASTX nr result

ID: Coptis24_contig00029021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029021
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299081.1| tir-nbs resistance protein [Populus trichoca...   166   2e-39
ref|XP_003523852.1| PREDICTED: uncharacterized protein LOC100780...   161   5e-38
ref|XP_003526385.1| PREDICTED: uncharacterized protein LOC100781...   161   6e-38
gb|EEC83817.1| hypothetical protein OsI_29754 [Oryza sativa Indi...   161   6e-38
gb|EAZ43219.1| hypothetical protein OsJ_27818 [Oryza sativa Japo...   161   6e-38

>ref|XP_002299081.1| tir-nbs resistance protein [Populus trichocarpa]
           gi|222846339|gb|EEE83886.1| tir-nbs resistance protein
           [Populus trichocarpa]
          Length = 996

 Score =  166 bits (420), Expect = 2e-39
 Identities = 80/100 (80%), Positives = 89/100 (89%)
 Frame = +2

Query: 20  VSPSCNAKLRSCDVYIGYYGQQNSNLLRFCKWLKSELEIQGIACFVADRAKYSDTQSHEI 199
           VSP+ NAKLRSCDVYIGY+GQ N NL+RFCKWLKSELE+QGI CFVADRAKYS+TQSHEI
Sbjct: 176 VSPASNAKLRSCDVYIGYHGQ-NPNLMRFCKWLKSELELQGIVCFVADRAKYSNTQSHEI 234

Query: 200 ADRIICSATFGVVVVTNPSFLNHFSMEEIAFFTQKKILIP 319
           ADR+ICS T+GVVVVTN S LNH S+EEI FF QKK L+P
Sbjct: 235 ADRVICSVTYGVVVVTNSSILNHPSLEEIRFFAQKKNLVP 274


>ref|XP_003523852.1| PREDICTED: uncharacterized protein LOC100780810 [Glycine max]
          Length = 1019

 Score =  161 bits (408), Expect = 5e-38
 Identities = 77/100 (77%), Positives = 88/100 (88%)
 Frame = +2

Query: 20  VSPSCNAKLRSCDVYIGYYGQQNSNLLRFCKWLKSELEIQGIACFVADRAKYSDTQSHEI 199
           VSP+ NAKLRSCDVYIG++GQ N NL+RFCKWLKSELE+QGI C +ADRAKYSD+QSHEI
Sbjct: 198 VSPATNAKLRSCDVYIGFHGQ-NPNLVRFCKWLKSELELQGIDCMLADRAKYSDSQSHEI 256

Query: 200 ADRIICSATFGVVVVTNPSFLNHFSMEEIAFFTQKKILIP 319
           ADR+ICS  FGVVVVT+ SFLNH+S EE+ FF QKK LIP
Sbjct: 257 ADRVICSVAFGVVVVTSSSFLNHYSTEEVRFFAQKKNLIP 296


>ref|XP_003526385.1| PREDICTED: uncharacterized protein LOC100781208 [Glycine max]
          Length = 991

 Score =  161 bits (407), Expect = 6e-38
 Identities = 75/101 (74%), Positives = 89/101 (88%)
 Frame = +2

Query: 17  SVSPSCNAKLRSCDVYIGYYGQQNSNLLRFCKWLKSELEIQGIACFVADRAKYSDTQSHE 196
           ++SP+ NAKLRSCDVYIG++GQ N NL+RFCKWLKSELE+QGI C +ADR KYSD+QSHE
Sbjct: 169 AISPASNAKLRSCDVYIGFHGQ-NPNLVRFCKWLKSELELQGIDCMLADRGKYSDSQSHE 227

Query: 197 IADRIICSATFGVVVVTNPSFLNHFSMEEIAFFTQKKILIP 319
           IADR+ICS  FGVVVVT+ SFLNH++MEE+ FF QKK LIP
Sbjct: 228 IADRVICSVAFGVVVVTSSSFLNHYTMEEVRFFAQKKNLIP 268


>gb|EEC83817.1| hypothetical protein OsI_29754 [Oryza sativa Indica Group]
          Length = 967

 Score =  161 bits (407), Expect = 6e-38
 Identities = 81/105 (77%), Positives = 88/105 (83%)
 Frame = +2

Query: 5   TKASSVSPSCNAKLRSCDVYIGYYGQQNSNLLRFCKWLKSELEIQGIACFVADRAKYSDT 184
           T+ S  SPS NAKLRSCDVYIGY+G  N +L RFCKWLKSELE+QGIA FVADRAKYSDT
Sbjct: 136 TRGSVASPSSNAKLRSCDVYIGYHG--NGSLGRFCKWLKSELELQGIASFVADRAKYSDT 193

Query: 185 QSHEIADRIICSATFGVVVVTNPSFLNHFSMEEIAFFTQKKILIP 319
           QSHEIADRIICS  FGV+VVT  SFLN FS+EEI FF QKK L+P
Sbjct: 194 QSHEIADRIICSVAFGVIVVTMSSFLNPFSLEEIRFFAQKKNLVP 238


>gb|EAZ43219.1| hypothetical protein OsJ_27818 [Oryza sativa Japonica Group]
          Length = 914

 Score =  161 bits (407), Expect = 6e-38
 Identities = 81/105 (77%), Positives = 88/105 (83%)
 Frame = +2

Query: 5   TKASSVSPSCNAKLRSCDVYIGYYGQQNSNLLRFCKWLKSELEIQGIACFVADRAKYSDT 184
           T+ S  SPS NAKLRSCDVYIGY+G  N +L RFCKWLKSELE+QGIA FVADRAKYSDT
Sbjct: 83  TRGSVASPSSNAKLRSCDVYIGYHG--NGSLGRFCKWLKSELELQGIASFVADRAKYSDT 140

Query: 185 QSHEIADRIICSATFGVVVVTNPSFLNHFSMEEIAFFTQKKILIP 319
           QSHEIADRIICS  FGV+VVT  SFLN FS+EEI FF QKK L+P
Sbjct: 141 QSHEIADRIICSVAFGVIVVTMSSFLNPFSLEEIRFFAQKKNLVP 185


Top