BLASTX nr result

ID: Coptis24_contig00029019 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029019
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155482.1| PREDICTED: LOW QUALITY PROTEIN: protein STRU...   119   3e-25
ref|XP_004137013.1| PREDICTED: protein STRUBBELIG-RECEPTOR FAMIL...   119   3e-25
ref|XP_002521411.1| lrr receptor-linked protein kinase, putative...   114   6e-24
ref|XP_002319371.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23
emb|CBI28913.3| unnamed protein product [Vitis vinifera]              112   4e-23

>ref|XP_004155482.1| PREDICTED: LOW QUALITY PROTEIN: protein STRUBBELIG-RECEPTOR FAMILY
           3-like [Cucumis sativus]
          Length = 791

 Score =  119 bits (298), Expect = 3e-25
 Identities = 65/118 (55%), Positives = 80/118 (67%), Gaps = 24/118 (20%)
 Frame = -2

Query: 284 ELGDNLDIFTSMIEINLSDNHIGGSIPSNLPLTIRNFVLSANQFNGSIPDSVSSLTQLT- 108
           ELGDNL +F+S+  I+LS+NHIGGSIPSNLP+T++NF LSANQF GSIP S+SSLTQLT 
Sbjct: 91  ELGDNLGLFSSIQTIDLSNNHIGGSIPSNLPVTLQNFFLSANQFTGSIPSSLSSLTQLTA 150

Query: 107 -----------------------DLELSGNNLSGQLPSALENLSSLMTLHLQDNHLSG 3
                                  + +LS NNLSG LP ++ NL +L TLHLQ+N LSG
Sbjct: 151 MSLNDNKLSGEIPDSFQVISQLVNFDLSNNNLSGPLPPSVSNLLALTTLHLQNNQLSG 208


>ref|XP_004137013.1| PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 3-like [Cucumis
           sativus]
          Length = 721

 Score =  119 bits (298), Expect = 3e-25
 Identities = 65/118 (55%), Positives = 80/118 (67%), Gaps = 24/118 (20%)
 Frame = -2

Query: 284 ELGDNLDIFTSMIEINLSDNHIGGSIPSNLPLTIRNFVLSANQFNGSIPDSVSSLTQLT- 108
           ELGDNL +F+S+  I+LS+NHIGGSIPSNLP+T++NF LSANQF GSIP S+SSLTQLT 
Sbjct: 91  ELGDNLGLFSSIQTIDLSNNHIGGSIPSNLPVTLQNFFLSANQFTGSIPSSLSSLTQLTA 150

Query: 107 -----------------------DLELSGNNLSGQLPSALENLSSLMTLHLQDNHLSG 3
                                  + +LS NNLSG LP ++ NL +L TLHLQ+N LSG
Sbjct: 151 MSLNDNKLSGEIPDSFQVISQLVNFDLSNNNLSGPLPPSVSNLLALTTLHLQNNQLSG 208


>ref|XP_002521411.1| lrr receptor-linked protein kinase, putative [Ricinus communis]
           gi|223539310|gb|EEF40901.1| lrr receptor-linked protein
           kinase, putative [Ricinus communis]
          Length = 672

 Score =  114 bits (286), Expect = 6e-24
 Identities = 64/117 (54%), Positives = 79/117 (67%), Gaps = 24/117 (20%)
 Frame = -2

Query: 281 LGDNLDIFTSMIEINLSDNHIGGSIPSNLPLTIRNFVLSANQFNGSIPDSVSSLTQ---- 114
           L D+L +F S+IEI+LS+NHIGGSIPS+LP T+R F L+ NQFNGSIPD++S+LTQ    
Sbjct: 85  LADDLALFESIIEIDLSNNHIGGSIPSSLPPTLRIFSLAGNQFNGSIPDTLSTLTQLSHL 144

Query: 113 --------------------LTDLELSGNNLSGQLPSALENLSSLMTLHLQDNHLSG 3
                               LT+L+LSGNNLSGQLP +L NLSSL +LHLQ N   G
Sbjct: 145 SINDNHLSGEMPDAFQQLTSLTNLDLSGNNLSGQLPPSLGNLSSLSSLHLQSNKFVG 201


>ref|XP_002319371.1| predicted protein [Populus trichocarpa] gi|222857747|gb|EEE95294.1|
           predicted protein [Populus trichocarpa]
          Length = 699

 Score =  114 bits (284), Expect = 1e-23
 Identities = 64/118 (54%), Positives = 77/118 (65%), Gaps = 24/118 (20%)
 Frame = -2

Query: 284 ELGDNLDIFTSMIEINLSDNHIGGSIPSNLPLTIRNFVLSANQFNGSIPDSVSSLT---- 117
           ELGDNL +F S+I I LS+NHIGGSIPSNLP+T++N  LS N F GSIPDS+S+LT    
Sbjct: 54  ELGDNLGMFASIISIGLSNNHIGGSIPSNLPVTMQNLFLSDNNFTGSIPDSLSTLTLLKA 113

Query: 116 --------------------QLTDLELSGNNLSGQLPSALENLSSLMTLHLQDNHLSG 3
                                L +L+LS NNLSGQLPS+  +L+SL TL LQDN LSG
Sbjct: 114 MSLNDNFLSGEIPDAFQALPGLINLDLSNNNLSGQLPSSFIDLASLTTLRLQDNQLSG 171


>emb|CBI28913.3| unnamed protein product [Vitis vinifera]
          Length = 781

 Score =  112 bits (279), Expect = 4e-23
 Identities = 65/118 (55%), Positives = 78/118 (66%), Gaps = 24/118 (20%)
 Frame = -2

Query: 284 ELGDNLDIFTSMIEINLSDNHIGGSIPSNLPLTIRNFVLSANQFNGSIPDSVSSLTQLTD 105
           ELGD+L  F S+  I+LS+N IGGSIPS+LPLT++NF LSANQF GSIP S+SSL+ LTD
Sbjct: 94  ELGDSLGTFASIKVIDLSNNQIGGSIPSSLPLTLQNFFLSANQFTGSIPTSLSSLSLLTD 153

Query: 104 ------------------------LELSGNNLSGQLPSALENLSSLMTLHLQDNHLSG 3
                                   L+LS N+LSGQLP ++ENLSSL TL LQ N LSG
Sbjct: 154 MSLNNNLLTGEIPDAFQALVGLINLDLSSNHLSGQLPPSMENLSSLTTLRLQINQLSG 211


Top