BLASTX nr result

ID: Coptis24_contig00028996 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028996
         (577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62850.1| hypothetical protein VITISV_010154 [Vitis vinifera]   175   6e-42
ref|XP_002307575.1| predicted protein [Populus trichocarpa] gi|2...   173   2e-41
ref|XP_004158632.1| PREDICTED: antifungal protein ginkbilobin-2-...   170   2e-40
ref|XP_002520760.1| conserved hypothetical protein [Ricinus comm...   167   2e-39
ref|XP_004140220.1| PREDICTED: antifungal protein ginkbilobin-2-...   164   8e-39

>emb|CAN62850.1| hypothetical protein VITISV_010154 [Vitis vinifera]
          Length = 133

 Score =  175 bits (443), Expect = 6e-42
 Identities = 76/133 (57%), Positives = 104/133 (78%)
 Frame = +1

Query: 94  MVSLARIAAVVVGLLAVSNMVESVPNTNITTVLCNSGSFTAGDPFATSLAYVLDDLMGFT 273
           M SL+ +  +V+GLL +   V S P+ ++T +LCN G +T GDPFATSL YV++DL   T
Sbjct: 1   MASLSNMLILVIGLLGLYGTVRSDPDISVTLILCNGGGYTKGDPFATSLTYVVEDLEAKT 60

Query: 274 PSKNGYDYYNISPYPNAFAYGHARCNSSLISGDCTTCLRASKQALFSTCQSRIGARSVLY 453
           P + GY+YYNISPYPN+FAYG+A C+ +L S DC+TCL ++K A+F TC +RIGAR+VL+
Sbjct: 61  PKRKGYNYYNISPYPNSFAYGYASCSQNLTSKDCSTCLSSAKTAMFGTCDNRIGARAVLH 120

Query: 454 DCRIRYEQYPFNE 492
           DC+IRYEQYPF++
Sbjct: 121 DCQIRYEQYPFDD 133


>ref|XP_002307575.1| predicted protein [Populus trichocarpa] gi|222857024|gb|EEE94571.1|
           predicted protein [Populus trichocarpa]
          Length = 133

 Score =  173 bits (439), Expect = 2e-41
 Identities = 77/128 (60%), Positives = 99/128 (77%)
 Frame = +1

Query: 109 RIAAVVVGLLAVSNMVESVPNTNITTVLCNSGSFTAGDPFATSLAYVLDDLMGFTPSKNG 288
           ++A V +G      +  SVP+TN+TTVLCNSG ++ GDPF TSLAYVL ++   TP+   
Sbjct: 6   KLALVFIGFFGWCVIATSVPDTNVTTVLCNSGVYSKGDPFGTSLAYVLAEIEAVTPTSKN 65

Query: 289 YDYYNISPYPNAFAYGHARCNSSLISGDCTTCLRASKQALFSTCQSRIGARSVLYDCRIR 468
           YDY+NISPYPNA AYGHA CN +L S DC++CL  +K A+F++CQSRIGARSVL+DC IR
Sbjct: 66  YDYFNISPYPNAVAYGHAACNQNLTSSDCSSCLGTAKTAMFASCQSRIGARSVLHDCTIR 125

Query: 469 YEQYPFNE 492
           YEQYPF++
Sbjct: 126 YEQYPFSD 133


>ref|XP_004158632.1| PREDICTED: antifungal protein ginkbilobin-2-like [Cucumis sativus]
          Length = 134

 Score =  170 bits (430), Expect = 2e-40
 Identities = 77/131 (58%), Positives = 95/131 (72%)
 Frame = +1

Query: 100 SLARIAAVVVGLLAVSNMVESVPNTNITTVLCNSGSFTAGDPFATSLAYVLDDLMGFTPS 279
           S  +I+   +   A+S MV S+PNT + +VLCNSG+FT GDPF  SL YVL +L   TP+
Sbjct: 4   SSPKISVAFLAFFALSIMVVSIPNTGVRSVLCNSGTFTGGDPFTVSLDYVLKELQSATPT 63

Query: 280 KNGYDYYNISPYPNAFAYGHARCNSSLISGDCTTCLRASKQALFSTCQSRIGARSVLYDC 459
              YD+YNISPYPNAFAYGHA CN +L + DCTTCL A+K  +  +CQ RIG RSVL DC
Sbjct: 64  IKNYDFYNISPYPNAFAYGHASCNQNLTTSDCTTCLEAAKNNMLGSCQMRIGGRSVLNDC 123

Query: 460 RIRYEQYPFNE 492
            IRYEQYPF++
Sbjct: 124 TIRYEQYPFDD 134


>ref|XP_002520760.1| conserved hypothetical protein [Ricinus communis]
           gi|223540145|gb|EEF41722.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 135

 Score =  167 bits (422), Expect = 2e-39
 Identities = 77/127 (60%), Positives = 96/127 (75%), Gaps = 1/127 (0%)
 Frame = +1

Query: 115 AAVVVGLLAV-SNMVESVPNTNITTVLCNSGSFTAGDPFATSLAYVLDDLMGFTPSKNGY 291
           A +++  L + S  V S+PNT + TVLCN+G ++  DPFA SLAYV+++L   T     Y
Sbjct: 9   AVMIISFLGLCSTKVTSMPNTQVLTVLCNAGVYSKADPFAISLAYVVEELEKKTAESKNY 68

Query: 292 DYYNISPYPNAFAYGHARCNSSLISGDCTTCLRASKQALFSTCQSRIGARSVLYDCRIRY 471
           DY+NISPYPNAFAYGHA CN +L S DCT CL A+K A+FS+C SRIGARSVL+DC IRY
Sbjct: 69  DYFNISPYPNAFAYGHAACNQNLTSSDCTACLGAAKTAMFSSCPSRIGARSVLHDCTIRY 128

Query: 472 EQYPFNE 492
           EQYPFN+
Sbjct: 129 EQYPFND 135


>ref|XP_004140220.1| PREDICTED: antifungal protein ginkbilobin-2-like [Cucumis sativus]
          Length = 114

 Score =  164 bits (416), Expect = 8e-39
 Identities = 73/114 (64%), Positives = 87/114 (76%)
 Frame = +1

Query: 151 MVESVPNTNITTVLCNSGSFTAGDPFATSLAYVLDDLMGFTPSKNGYDYYNISPYPNAFA 330
           MV S+PNT + +VLCNSG+FT GDPF  SL YVL +L   TP+   YD+YNISPYPNAFA
Sbjct: 1   MVVSIPNTGVRSVLCNSGTFTGGDPFTVSLDYVLKELQSATPTVKNYDFYNISPYPNAFA 60

Query: 331 YGHARCNSSLISGDCTTCLRASKQALFSTCQSRIGARSVLYDCRIRYEQYPFNE 492
           YGHA CN +L + DCTTCL A+K  +  +CQ RIG RSVL DC IRYEQYPF++
Sbjct: 61  YGHASCNQNLSTSDCTTCLEAAKNNMLGSCQMRIGGRSVLNDCTIRYEQYPFDD 114


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