BLASTX nr result

ID: Coptis24_contig00028974 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028974
         (637 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532436.1| conserved hypothetical protein [Ricinus comm...   147   2e-33
ref|XP_002266948.1| PREDICTED: uncharacterized protein LOC100253...   146   4e-33
emb|CAN83842.1| hypothetical protein VITISV_044078 [Vitis vinifera]   146   4e-33
ref|XP_002307494.1| predicted protein [Populus trichocarpa] gi|2...   141   1e-31
ref|XP_004140969.1| PREDICTED: uncharacterized protein LOC101203...   134   2e-29

>ref|XP_002532436.1| conserved hypothetical protein [Ricinus communis]
           gi|223527856|gb|EEF29951.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 415

 Score =  147 bits (371), Expect = 2e-33
 Identities = 72/107 (67%), Positives = 87/107 (81%)
 Frame = +2

Query: 2   SNRYQIYTVVLREGYNGSELIDKDPLVLVKEKFGELMQEGRHEYNQRRRALNLEKKKKKG 181
           SN+YQIYTV+LREGYNGSELIDKDPLVLVK+KFGELMQEG HEYNQR    NLEKKK+KG
Sbjct: 308 SNKYQIYTVILREGYNGSELIDKDPLVLVKDKFGELMQEGLHEYNQRHHLFNLEKKKRKG 367

Query: 182 MVIAKSGTKEQRSISQESEEDDRKGKQRDLYNPEERKRFYDVLFEED 322
           +V +++G +++ SI    E+D    K   L+NPEERKRFY VLF++D
Sbjct: 368 VVSSRAGKRKEDSIDM-PEQDYADDKLGGLFNPEERKRFYKVLFDDD 413


>ref|XP_002266948.1| PREDICTED: uncharacterized protein LOC100253756 [Vitis vinifera]
          Length = 419

 Score =  146 bits (368), Expect = 4e-33
 Identities = 73/106 (68%), Positives = 85/106 (80%)
 Frame = +2

Query: 2   SNRYQIYTVVLREGYNGSELIDKDPLVLVKEKFGELMQEGRHEYNQRRRALNLEKKKKKG 181
           SNRYQIYTV+LREGYNGSELIDKDPLV+VKEKFGELMQEG HEYN+R   +NLEKKKKKG
Sbjct: 312 SNRYQIYTVLLREGYNGSELIDKDPLVVVKEKFGELMQEGLHEYNRRHHLMNLEKKKKKG 371

Query: 182 MVIAKSGTKEQRSISQESEEDDRKGKQRDLYNPEERKRFYDVLFEE 319
           MV+  S     +S S+ SE+DD +     L +PEERKRFY VLF++
Sbjct: 372 MVLESSPKMRDKS-SEMSEQDDHESNLGGLLDPEERKRFYKVLFDD 416


>emb|CAN83842.1| hypothetical protein VITISV_044078 [Vitis vinifera]
          Length = 406

 Score =  146 bits (368), Expect = 4e-33
 Identities = 73/106 (68%), Positives = 85/106 (80%)
 Frame = +2

Query: 2   SNRYQIYTVVLREGYNGSELIDKDPLVLVKEKFGELMQEGRHEYNQRRRALNLEKKKKKG 181
           SNRYQIYTV+LREGYNGSELIDKDPLV+VKEKFGELMQEG HEYN+R   +NLEKKKKKG
Sbjct: 299 SNRYQIYTVLLREGYNGSELIDKDPLVVVKEKFGELMQEGLHEYNRRHHLMNLEKKKKKG 358

Query: 182 MVIAKSGTKEQRSISQESEEDDRKGKQRDLYNPEERKRFYDVLFEE 319
           MV+  S     +S S+ SE+DD +     L +PEERKRFY VLF++
Sbjct: 359 MVLESSPKMRDKS-SEMSEQDDHESNLGGLLDPEERKRFYKVLFDD 403


>ref|XP_002307494.1| predicted protein [Populus trichocarpa] gi|222856943|gb|EEE94490.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score =  141 bits (355), Expect = 1e-31
 Identities = 68/108 (62%), Positives = 90/108 (83%)
 Frame = +2

Query: 2   SNRYQIYTVVLREGYNGSELIDKDPLVLVKEKFGELMQEGRHEYNQRRRALNLEKKKKKG 181
           SN+YQIYTV+LREGYNGSELIDKDPLV+VK+KFGELMQEG HEYN+RR  +NLEK++KKG
Sbjct: 313 SNKYQIYTVLLREGYNGSELIDKDPLVVVKDKFGELMQEGLHEYNRRRYEVNLEKQRKKG 372

Query: 182 MVIAKSGTKEQRSISQESEEDDRKGKQRDLYNPEERKRFYDVLFEEDS 325
           +V  +   +++ S ++ +E+DD   K   L++PEERKRFY VLF++D+
Sbjct: 373 IVSVRKEKRKEGS-TEMTEQDDSGDKLGGLFDPEERKRFYKVLFDDDA 419


>ref|XP_004140969.1| PREDICTED: uncharacterized protein LOC101203802 [Cucumis sativus]
          Length = 418

 Score =  134 bits (336), Expect = 2e-29
 Identities = 67/110 (60%), Positives = 85/110 (77%), Gaps = 3/110 (2%)
 Frame = +2

Query: 2   SNRYQIYTVVLREGYNGSELIDKDPLVLVKEKFGELMQEGRHEYNQRRRALNLEKKKKKG 181
           SN+YQIYTVVLREGYNGSELI+KDPLV+VKEKFGELMQEG HEYN+R   +NLEKK+ KG
Sbjct: 311 SNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHEYNKRHHLMNLEKKRMKG 370

Query: 182 MVIAKSGTKEQRSISQESEEDDRKGKQRD---LYNPEERKRFYDVLFEED 322
           M++ +S    +++  ++ E DD  G+  +   L  PEERKRFY  LF++D
Sbjct: 371 MLLGRS----EKNKRKDFETDDSNGQGNNLGGLLEPEERKRFYQSLFDDD 416


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