BLASTX nr result

ID: Coptis24_contig00028967 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028967
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273020.1| PREDICTED: uncharacterized protein LOC100241...   244   7e-63
ref|XP_002315147.1| predicted protein [Populus trichocarpa] gi|2...   241   3e-62
ref|XP_003538476.1| PREDICTED: uncharacterized protein LOC100804...   240   8e-62
ref|XP_003552278.1| PREDICTED: uncharacterized protein LOC100788...   237   6e-61
ref|XP_002878057.1| hypothetical protein ARALYDRAFT_486043 [Arab...   234   7e-60

>ref|XP_002273020.1| PREDICTED: uncharacterized protein LOC100241552 [Vitis vinifera]
           gi|297736576|emb|CBI25447.3| unnamed protein product
           [Vitis vinifera]
          Length = 860

 Score =  244 bits (622), Expect = 7e-63
 Identities = 119/141 (84%), Positives = 127/141 (90%)
 Frame = -3

Query: 428 PVCKPGGHGVIWKLAYDKGVFQWFYGHGRKGATVRQVSNVVAATDFTLLALAGIGLKNRK 249
           PVCKPGGHGVIWKLAYDKG+FQWFY HGRKGATVRQVSNVVAATD TLLALAGIGL++RK
Sbjct: 406 PVCKPGGHGVIWKLAYDKGIFQWFYDHGRKGATVRQVSNVVAATDLTLLALAGIGLRHRK 465

Query: 248 KLGFASCKRKVGATEGINVLIERKRIDGDWEYGLSCIEYTEFDKYGITTGPTSYHSLQAE 69
           K+GFASCKR  GATEGINVLIE K +DG WEYGLSCIEYTEFDK+GIT G  S +SLQA 
Sbjct: 466 KMGFASCKRNSGATEGINVLIE-KNLDGKWEYGLSCIEYTEFDKFGITDGLLSSNSLQAG 524

Query: 68  FPANTNILYIDLASAEKVGSS 6
           FPANTNILY+DL SAE VGSS
Sbjct: 525 FPANTNILYVDLPSAELVGSS 545


>ref|XP_002315147.1| predicted protein [Populus trichocarpa] gi|222864187|gb|EEF01318.1|
           predicted protein [Populus trichocarpa]
          Length = 877

 Score =  241 bits (616), Expect = 3e-62
 Identities = 115/141 (81%), Positives = 124/141 (87%)
 Frame = -3

Query: 428 PVCKPGGHGVIWKLAYDKGVFQWFYGHGRKGATVRQVSNVVAATDFTLLALAGIGLKNRK 249
           PVCKPGGHGVIWKLAYDKG+F+WFY H RKGATVRQVSNVVAATD TLLALAGIGL++RK
Sbjct: 422 PVCKPGGHGVIWKLAYDKGIFEWFYDHDRKGATVRQVSNVVAATDLTLLALAGIGLRHRK 481

Query: 248 KLGFASCKRKVGATEGINVLIERKRIDGDWEYGLSCIEYTEFDKYGITTGPTSYHSLQAE 69
           KLGFASCKR  GATEGINVLIE+K +DG W YGLSCIEYTEFDK+ IT GP S + LQAE
Sbjct: 482 KLGFASCKRNSGATEGINVLIEKKNLDGQWAYGLSCIEYTEFDKFEITGGPCSTNGLQAE 541

Query: 68  FPANTNILYIDLASAEKVGSS 6
           FPANTNILY+DL S E V SS
Sbjct: 542 FPANTNILYVDLPSLELVASS 562


>ref|XP_003538476.1| PREDICTED: uncharacterized protein LOC100804343 [Glycine max]
          Length = 766

 Score =  240 bits (613), Expect = 8e-62
 Identities = 115/142 (80%), Positives = 127/142 (89%)
 Frame = -3

Query: 428 PVCKPGGHGVIWKLAYDKGVFQWFYGHGRKGATVRQVSNVVAATDFTLLALAGIGLKNRK 249
           P+ KPGGHGVIWKLAYDKG+F+WFY  GRKGATVRQVSNVVAATD TLLALAGIGL+  K
Sbjct: 311 PLSKPGGHGVIWKLAYDKGIFKWFYCQGRKGATVRQVSNVVAATDLTLLALAGIGLRQGK 370

Query: 248 KLGFASCKRKVGATEGINVLIERKRIDGDWEYGLSCIEYTEFDKYGITTGPTSYHSLQAE 69
           KLGFASCKR  GATEG+NVL+E+K +DG+WEYG+SCIEYTEFDK+GITTGP +   LQAE
Sbjct: 371 KLGFASCKRISGATEGVNVLMEKKSLDGNWEYGVSCIEYTEFDKFGITTGPLAPKGLQAE 430

Query: 68  FPANTNILYIDLASAEKVGSSK 3
           FPANTNILYIDL SAE VGSSK
Sbjct: 431 FPANTNILYIDLPSAELVGSSK 452


>ref|XP_003552278.1| PREDICTED: uncharacterized protein LOC100788781 [Glycine max]
          Length = 857

 Score =  237 bits (605), Expect = 6e-61
 Identities = 113/142 (79%), Positives = 126/142 (88%)
 Frame = -3

Query: 428 PVCKPGGHGVIWKLAYDKGVFQWFYGHGRKGATVRQVSNVVAATDFTLLALAGIGLKNRK 249
           P+ KPGGHGVIWKLA+DKG+F WFY  GRKGATVRQVSNVVAATD TLLALAGIGL+  K
Sbjct: 402 PLSKPGGHGVIWKLAHDKGIFTWFYCQGRKGATVRQVSNVVAATDLTLLALAGIGLRQGK 461

Query: 248 KLGFASCKRKVGATEGINVLIERKRIDGDWEYGLSCIEYTEFDKYGITTGPTSYHSLQAE 69
           KLGFASCKR +GATEG+NVL+E+K +DG+WEYG+SCIEYTEFDK+GITTGP +   LQ E
Sbjct: 462 KLGFASCKRILGATEGVNVLMEKKSLDGNWEYGVSCIEYTEFDKFGITTGPLAPKGLQTE 521

Query: 68  FPANTNILYIDLASAEKVGSSK 3
           FPANTNILYIDL SAE VGSSK
Sbjct: 522 FPANTNILYIDLPSAELVGSSK 543


>ref|XP_002878057.1| hypothetical protein ARALYDRAFT_486043 [Arabidopsis lyrata subsp.
           lyrata] gi|297323895|gb|EFH54316.1| hypothetical protein
           ARALYDRAFT_486043 [Arabidopsis lyrata subsp. lyrata]
          Length = 883

 Score =  234 bits (596), Expect = 7e-60
 Identities = 111/141 (78%), Positives = 122/141 (86%)
 Frame = -3

Query: 428 PVCKPGGHGVIWKLAYDKGVFQWFYGHGRKGATVRQVSNVVAATDFTLLALAGIGLKNRK 249
           PV KPGGHGVIWKLAYDKGVF WFY HGRKGATVRQVSNVVAATD TLLALAGIGL+  K
Sbjct: 425 PVSKPGGHGVIWKLAYDKGVFNWFYDHGRKGATVRQVSNVVAATDVTLLALAGIGLRYNK 484

Query: 248 KLGFASCKRKVGATEGINVLIERKRIDGDWEYGLSCIEYTEFDKYGITTGPTSYHSLQAE 69
           KLGFASCKR  GATEGINVL+E+K  DG WEYG+SCIEYTEFD++GI+    S + LQA+
Sbjct: 485 KLGFASCKRNAGATEGINVLMEKKNFDGKWEYGISCIEYTEFDRFGISNRSPSSNGLQAD 544

Query: 68  FPANTNILYIDLASAEKVGSS 6
           FPANTNILY+DL SAE +GSS
Sbjct: 545 FPANTNILYVDLHSAELIGSS 565


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