BLASTX nr result

ID: Coptis24_contig00028927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028927
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262628.1| PREDICTED: disease resistance protein At4g27...    76   3e-12
emb|CBI24353.3| unnamed protein product [Vitis vinifera]               74   2e-11
ref|XP_002270165.1| PREDICTED: disease resistance protein At4g27...    74   2e-11
emb|CBI32910.3| unnamed protein product [Vitis vinifera]               72   5e-11
emb|CBI20505.3| unnamed protein product [Vitis vinifera]               72   5e-11

>ref|XP_002262628.1| PREDICTED: disease resistance protein At4g27190-like [Vitis
           vinifera]
          Length = 1069

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 44/143 (30%), Positives = 79/143 (55%), Gaps = 7/143 (4%)
 Frame = +3

Query: 48  ILKKIWENLMDCRVGIVGIWGLG-ISRNATMMTIRNML---AATNIFNKIIWVHCSEDMS 215
           IL K+   L D  VG +G+WG+G + +   +  + N L   ++T  F  +IW+  S+ + 
Sbjct: 244 ILAKLMNLLNDDEVGRIGVWGMGGVGKTTLVKNLNNKLRNDSSTRPFGIVIWITVSKQLD 303

Query: 216 VDEVWDVIGMQLDVFIPMHEDYRSQAARVLNSLE---KVLFIFYDMSKTISFKKLGIPLP 386
           +  +   I  ++++ + M+E   S A+++   LE   K L I  D+ + I+   LG+P P
Sbjct: 304 LARIQTQIAQRVNMGVNMNESTESVASKLHQRLEQQNKFLLILDDVWEEIALDALGVPRP 363

Query: 387 NESNGCKIMVTSDFWEVRRRMET 455
               GCKI++T+ F++V R M+T
Sbjct: 364 EVHGGCKIILTTRFFDVCRDMKT 386


>emb|CBI24353.3| unnamed protein product [Vitis vinifera]
          Length = 1195

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 45/142 (31%), Positives = 75/142 (52%), Gaps = 7/142 (4%)
 Frame = +3

Query: 51  LKKIWENLMDCRVGIVGIWGLG-ISRNATMMTIRNML---AATNIFNKIIWVHCSEDMSV 218
           L KI   L D  VG +G+WG+G + +   +  + N L   ++T  F  +IW+  S++M +
Sbjct: 153 LAKIMSLLNDDGVGRIGVWGMGGVGKTTLVKNLNNKLRDASSTQSFGIVIWITVSKEMDL 212

Query: 219 DEVWDVIGMQLDVFIPMHEDYRSQAARVLNSLEK---VLFIFYDMSKTISFKKLGIPLPN 389
             +   I  +L++ + M E     A ++ + L+K    L IF D+ K I    LG+P P 
Sbjct: 213 KRIQVQIAQRLNMAVDMDETTERMAIKLFHRLKKENKFLLIFDDVWKGIHLDSLGVPQPE 272

Query: 390 ESNGCKIMVTSDFWEVRRRMET 455
           +  GCKI++T+   +V R M T
Sbjct: 273 DHVGCKIVLTTRSLDVCRVMRT 294


>ref|XP_002270165.1| PREDICTED: disease resistance protein At4g27190-like [Vitis
           vinifera]
          Length = 982

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 45/142 (31%), Positives = 75/142 (52%), Gaps = 7/142 (4%)
 Frame = +3

Query: 51  LKKIWENLMDCRVGIVGIWGLG-ISRNATMMTIRNML---AATNIFNKIIWVHCSEDMSV 218
           L KI   L D  VG +G+WG+G + +   +  + N L   ++T  F  +IW+  S++M +
Sbjct: 153 LAKIMSLLNDDGVGRIGVWGMGGVGKTTLVKNLNNKLRDASSTQSFGIVIWITVSKEMDL 212

Query: 219 DEVWDVIGMQLDVFIPMHEDYRSQAARVLNSLEK---VLFIFYDMSKTISFKKLGIPLPN 389
             +   I  +L++ + M E     A ++ + L+K    L IF D+ K I    LG+P P 
Sbjct: 213 KRIQVQIAQRLNMAVDMDETTERMAIKLFHRLKKENKFLLIFDDVWKGIHLDSLGVPQPE 272

Query: 390 ESNGCKIMVTSDFWEVRRRMET 455
           +  GCKI++T+   +V R M T
Sbjct: 273 DHVGCKIVLTTRSLDVCRVMRT 294


>emb|CBI32910.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 41/135 (30%), Positives = 75/135 (55%), Gaps = 7/135 (5%)
 Frame = +3

Query: 72  LMDCRVGIVGIWGLG-ISRNATMMTIRNML---AATNIFNKIIWVHCSEDMSVDEVWDVI 239
           L D  VG +G+WG+G + +   +  + N L   ++T  F  +IW+  S+ + +  +   I
Sbjct: 4   LNDDEVGRIGVWGMGGVGKTTLVKNLNNKLRNDSSTRPFGIVIWITVSKQLDLARIQTQI 63

Query: 240 GMQLDVFIPMHEDYRSQAARVLNSLE---KVLFIFYDMSKTISFKKLGIPLPNESNGCKI 410
             ++++ + M+E   S A+++   LE   K L I  D+ + I+   LG+P P    GCKI
Sbjct: 64  AQRVNMGVNMNESTESVASKLHQRLEQQNKFLLILDDVWEEIALDALGVPRPEVHGGCKI 123

Query: 411 MVTSDFWEVRRRMET 455
           ++T+ F++V R M+T
Sbjct: 124 ILTTRFFDVCRDMKT 138


>emb|CBI20505.3| unnamed protein product [Vitis vinifera]
          Length = 923

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 44/141 (31%), Positives = 74/141 (52%), Gaps = 7/141 (4%)
 Frame = +3

Query: 51  LKKIWENLMDCRVGIVGIWGLG-ISRNATMMTIRNML---AATNIFNKIIWVHCSEDMSV 218
           L +I + L D  V  +G+WG+G + +   +  + N L   ++   F  +IWV  S+D+ +
Sbjct: 154 LARIMDLLNDDGVKSIGVWGMGGVGKTTLVKNLNNKLENASSAQPFGVVIWVTVSKDLDL 213

Query: 219 DEVWDVIGMQLDVFIPMHEDYRSQAARVLNSLE---KVLFIFYDMSKTISFKKLGIPLPN 389
             +   I  +L+V + M E   S A ++   L+   K L I  D+ K I    LG+P P 
Sbjct: 214 RRIQMQIAHRLNVEVKMEESTESLAVKLFRRLKRTGKFLLILDDVWKGIDLDALGVPRPE 273

Query: 390 ESNGCKIMVTSDFWEVRRRME 452
              GCKI++T+ F +V R+M+
Sbjct: 274 VHTGCKIIITTRFLDVCRQMK 294


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