BLASTX nr result

ID: Coptis24_contig00028916 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028916
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32734.3| unnamed protein product [Vitis vinifera]              114   1e-23
ref|XP_002281344.1| PREDICTED: uncharacterized protein LOC100261...   114   1e-23
ref|XP_002322880.1| predicted protein [Populus trichocarpa] gi|2...   108   3e-22
ref|XP_002519535.1| conserved hypothetical protein [Ricinus comm...   108   5e-22
ref|XP_002326184.1| predicted protein [Populus trichocarpa] gi|2...   108   6e-22

>emb|CBI32734.3| unnamed protein product [Vitis vinifera]
          Length = 114

 Score =  114 bits (284), Expect = 1e-23
 Identities = 51/83 (61%), Positives = 69/83 (83%)
 Frame = -1

Query: 250 SIYLRLWSIDSEFSHEDSELIRRQFDIANKEAMDESAEWRFKYDAEVDRTTKCNKQLIQV 71
           +IY RLW+ID   S +++E++RRQFD+AN+EAMDESAEWR KYD EV+R TKC  +LI+V
Sbjct: 6   AIYFRLWTIDYTISSDETEILRRQFDLANREAMDESAEWRLKYDEEVERATKCLNELIKV 65

Query: 70  KETLQKKLEEVASVNKNVAMLQK 2
           KE+ +KK+E+ AS N+ +AMLQK
Sbjct: 66  KESSEKKVEDAASTNQKLAMLQK 88


>ref|XP_002281344.1| PREDICTED: uncharacterized protein LOC100261864 [Vitis vinifera]
          Length = 128

 Score =  114 bits (284), Expect = 1e-23
 Identities = 51/83 (61%), Positives = 69/83 (83%)
 Frame = -1

Query: 250 SIYLRLWSIDSEFSHEDSELIRRQFDIANKEAMDESAEWRFKYDAEVDRTTKCNKQLIQV 71
           +IY RLW+ID   S +++E++RRQFD+AN+EAMDESAEWR KYD EV+R TKC  +LI+V
Sbjct: 20  AIYFRLWTIDYTISSDETEILRRQFDLANREAMDESAEWRLKYDEEVERATKCLNELIKV 79

Query: 70  KETLQKKLEEVASVNKNVAMLQK 2
           KE+ +KK+E+ AS N+ +AMLQK
Sbjct: 80  KESSEKKVEDAASTNQKLAMLQK 102


>ref|XP_002322880.1| predicted protein [Populus trichocarpa] gi|222867510|gb|EEF04641.1|
           predicted protein [Populus trichocarpa]
          Length = 128

 Score =  108 bits (271), Expect = 3e-22
 Identities = 49/83 (59%), Positives = 68/83 (81%)
 Frame = -1

Query: 250 SIYLRLWSIDSEFSHEDSELIRRQFDIANKEAMDESAEWRFKYDAEVDRTTKCNKQLIQV 71
           ++Y RLW+ID   S +D+ELIRRQFD+AN+EA+DESAEWR KYD EV+R+ KC+KQLI++
Sbjct: 21  AVYFRLWTIDYAISSDDTELIRRQFDLANREALDESAEWRMKYDEEVERSAKCDKQLIEI 80

Query: 70  KETLQKKLEEVASVNKNVAMLQK 2
           K+    K+E+ AS+N+ + MLQK
Sbjct: 81  KQ----KVEDAASINQQLVMLQK 99


>ref|XP_002519535.1| conserved hypothetical protein [Ricinus communis]
           gi|223541398|gb|EEF42949.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 124

 Score =  108 bits (270), Expect = 5e-22
 Identities = 49/83 (59%), Positives = 67/83 (80%)
 Frame = -1

Query: 250 SIYLRLWSIDSEFSHEDSELIRRQFDIANKEAMDESAEWRFKYDAEVDRTTKCNKQLIQV 71
           ++YLRLWSID   S +D+ELIRRQFD+AN+EAMDESAEWR KYD E +R  KC+K+LI++
Sbjct: 21  AVYLRLWSIDYAISSDDAELIRRQFDLANREAMDESAEWRMKYDEEAERAAKCDKELIEI 80

Query: 70  KETLQKKLEEVASVNKNVAMLQK 2
           K+    K+++ AS+N+ + MLQK
Sbjct: 81  KQ----KVDDAASINQQLVMLQK 99


>ref|XP_002326184.1| predicted protein [Populus trichocarpa] gi|222833377|gb|EEE71854.1|
           predicted protein [Populus trichocarpa]
          Length = 128

 Score =  108 bits (269), Expect = 6e-22
 Identities = 49/84 (58%), Positives = 67/84 (79%)
 Frame = -1

Query: 253 FSIYLRLWSIDSEFSHEDSELIRRQFDIANKEAMDESAEWRFKYDAEVDRTTKCNKQLIQ 74
           F++Y RLW+ID   S +D+ELIRRQFD+AN+EA+DESAEWR KYD EV+R  KC+KQL++
Sbjct: 20  FAVYFRLWTIDYAISSDDTELIRRQFDLANREALDESAEWRMKYDEEVERAAKCDKQLVE 79

Query: 73  VKETLQKKLEEVASVNKNVAMLQK 2
           +K+    K+ + ASVN+ + MLQK
Sbjct: 80  IKQ----KVGDAASVNQQLVMLQK 99


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