BLASTX nr result

ID: Coptis24_contig00028893 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028893
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525612.1| GDP-mannose transporter, putative [Ricinus c...   165   4e-39
ref|XP_002314115.1| predicted protein [Populus trichocarpa] gi|2...   164   7e-39
ref|XP_003552965.1| PREDICTED: GDP-mannose transporter GONST2-li...   159   2e-37
ref|XP_002279549.2| PREDICTED: GDP-mannose transporter GONST2-li...   156   1e-36
emb|CBI15984.3| unnamed protein product [Vitis vinifera]              156   1e-36

>ref|XP_002525612.1| GDP-mannose transporter, putative [Ricinus communis]
           gi|223535048|gb|EEF36730.1| GDP-mannose transporter,
           putative [Ricinus communis]
          Length = 383

 Score =  165 bits (417), Expect = 4e-39
 Identities = 79/91 (86%), Positives = 88/91 (96%)
 Frame = -3

Query: 273 NIAMVTVLKNMTNIITAIGELYIFKKHQSQKVWTAMFFMIISAVSGGITDLSFDAVGYSW 94
           NIAMVT+LKN+TNI+TAIGELYIF+KHQ+QKVWTAMF M+ISA+SGGITDLSFDA+GY W
Sbjct: 178 NIAMVTILKNVTNILTAIGELYIFRKHQNQKVWTAMFLMMISAISGGITDLSFDAMGYLW 237

Query: 93  QIMNCILTASYSLTLRRVMDKAKQLTRSGSL 1
           QIMNC+LTASYSLTLRRVMDKAKQ TRSGSL
Sbjct: 238 QIMNCVLTASYSLTLRRVMDKAKQSTRSGSL 268


>ref|XP_002314115.1| predicted protein [Populus trichocarpa] gi|222850523|gb|EEE88070.1|
           predicted protein [Populus trichocarpa]
          Length = 316

 Score =  164 bits (415), Expect = 7e-39
 Identities = 79/91 (86%), Positives = 88/91 (96%)
 Frame = -3

Query: 273 NIAMVTVLKNMTNIITAIGELYIFKKHQSQKVWTAMFFMIISAVSGGITDLSFDAVGYSW 94
           NIAMVT+LKN+TNIITAIGELYIF+KHQ+QKVWTAMF MIISA+SGGITDLSFD++GY+W
Sbjct: 108 NIAMVTILKNVTNIITAIGELYIFRKHQNQKVWTAMFLMIISAISGGITDLSFDSMGYTW 167

Query: 93  QIMNCILTASYSLTLRRVMDKAKQLTRSGSL 1
           QIMNCILTA YSLTLR+VMD AKQLTRSGSL
Sbjct: 168 QIMNCILTACYSLTLRKVMDTAKQLTRSGSL 198


>ref|XP_003552965.1| PREDICTED: GDP-mannose transporter GONST2-like [Glycine max]
          Length = 490

 Score =  159 bits (402), Expect = 2e-37
 Identities = 76/91 (83%), Positives = 86/91 (94%)
 Frame = -3

Query: 273 NIAMVTVLKNMTNIITAIGELYIFKKHQSQKVWTAMFFMIISAVSGGITDLSFDAVGYSW 94
           N+AMVT+LKNMTNI+TAIGELY+F+K QS KVWTAMF MIISAVSGGITDLSFDAVGY+W
Sbjct: 282 NVAMVTILKNMTNILTAIGELYLFRKRQSPKVWTAMFMMIISAVSGGITDLSFDAVGYTW 341

Query: 93  QIMNCILTASYSLTLRRVMDKAKQLTRSGSL 1
           QI+NC+LTASYSLTLRRVMD+AK  T+SGSL
Sbjct: 342 QIINCVLTASYSLTLRRVMDEAKNATKSGSL 372


>ref|XP_002279549.2| PREDICTED: GDP-mannose transporter GONST2-like [Vitis vinifera]
          Length = 398

 Score =  156 bits (395), Expect = 1e-36
 Identities = 76/91 (83%), Positives = 84/91 (92%)
 Frame = -3

Query: 273 NIAMVTVLKNMTNIITAIGELYIFKKHQSQKVWTAMFFMIISAVSGGITDLSFDAVGYSW 94
           NIAMVT+LKN+TNI+TAIGE YIF KHQ+QKVWTAMF MIISA+SGGITDLSF+  GY W
Sbjct: 191 NIAMVTILKNVTNILTAIGEYYIFHKHQNQKVWTAMFLMIISAISGGITDLSFNLKGYVW 250

Query: 93  QIMNCILTASYSLTLRRVMDKAKQLTRSGSL 1
           QI+NC+LTASYSLTLR VMDKAKQLTRSGSL
Sbjct: 251 QILNCVLTASYSLTLRLVMDKAKQLTRSGSL 281


>emb|CBI15984.3| unnamed protein product [Vitis vinifera]
          Length = 396

 Score =  156 bits (395), Expect = 1e-36
 Identities = 76/91 (83%), Positives = 84/91 (92%)
 Frame = -3

Query: 273 NIAMVTVLKNMTNIITAIGELYIFKKHQSQKVWTAMFFMIISAVSGGITDLSFDAVGYSW 94
           NIAMVT+LKN+TNI+TAIGE YIF KHQ+QKVWTAMF MIISA+SGGITDLSF+  GY W
Sbjct: 189 NIAMVTILKNVTNILTAIGEYYIFHKHQNQKVWTAMFLMIISAISGGITDLSFNLKGYVW 248

Query: 93  QIMNCILTASYSLTLRRVMDKAKQLTRSGSL 1
           QI+NC+LTASYSLTLR VMDKAKQLTRSGSL
Sbjct: 249 QILNCVLTASYSLTLRLVMDKAKQLTRSGSL 279