BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028875
         (914 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid...   109   1e-21
emb|CAB75484.1| putative protein [Arabidopsis thaliana]               107   3e-21
emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulga...   107   4e-21
ref|XP_002443080.1| hypothetical protein SORBIDRAFT_08g007680 [S...   107   5e-21
ref|XP_002451844.1| hypothetical protein SORBIDRAFT_04g008547 [S...   105   1e-20

>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
           gi|7267666|emb|CAB78094.1| RNA-directed DNA
           polymerase-like protein [Arabidopsis thaliana]
          Length = 1274

 Score =  109 bits (272), Expect = 1e-21
 Identities = 49/107 (45%), Positives = 74/107 (69%)
 Frame = -3

Query: 327 IHNNKSAGPDGFTGKFFHTY*DIIERDITNFIQQFYITAHFTKSLNHTNIVLIPKTKNPK 148
           I  +K+ GPDGF+  FFH Y DIIE D++  I+ F++ +  +  LN T++ LIPK   P+
Sbjct: 381 ISADKAPGPDGFSASFFHAYWDIIEADVSRDIRSFFVDSCLSPRLNETHVTLIPKISAPR 440

Query: 147 QPTHFRPIILCNVAYKILSKVIVNRLRPLLNKIICPFQSAFIPSRCI 7
           + + +RPI LCNV YKI++K++  RL+P L+++I   QSAF+P R I
Sbjct: 441 KVSDYRPIALCNVQYKIVAKILTRRLQPWLSELISLHQSAFVPGRAI 487


>emb|CAB75484.1| putative protein [Arabidopsis thaliana]
          Length = 851

 Score =  107 bits (268), Expect = 3e-21
 Identities = 49/109 (44%), Positives = 75/109 (68%)
 Frame = -3

Query: 327 IHNNKSAGPDGFTGKFFHTY*DIIERDITNFIQQFYITAHFTKSLNHTNIVLIPKTKNPK 148
           I ++K+ GPDG T +F+    DI+  D+   ++ F+ ++H   S+NHTNI +IPK +NP+
Sbjct: 61  IGDDKAPGPDGLTARFYKQCWDIVGNDVIKEVKLFFESSHMKTSVNHTNICMIPKIQNPQ 120

Query: 147 QPTHFRPIILCNVAYKILSKVIVNRLRPLLNKIICPFQSAFIPSRCIHN 1
             + +RPI LCNV YK++SK +VNRL+  LN I+   Q+AFIP R I++
Sbjct: 121 TLSDYRPIALCNVLYKVISKCMVNRLKAHLNSIVSDSQAAFIPGRIIND 169


>emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1365

 Score =  107 bits (267), Expect = 4e-21
 Identities = 48/103 (46%), Positives = 66/103 (64%)
 Frame = -3

Query: 315 KSAGPDGFTGKFFHTY*DIIERDITNFIQQFYITAHFTKSLNHTNIVLIPKTKNPKQPTH 136
           K+ GPDG    F+  +  I+  DI   +  F+ T +  +  N TNI LIPK + P+Q   
Sbjct: 457 KAPGPDGIPAIFYQKHWSIVGEDIWRAVSHFFTTGYILQEWNQTNICLIPKVERPEQACQ 516

Query: 135 FRPIILCNVAYKILSKVIVNRLRPLLNKIICPFQSAFIPSRCI 7
           FRPI LCNV YKI+SK+I NRL+P+L  I+ P+Q+AF+P R I
Sbjct: 517 FRPISLCNVIYKIISKIIANRLKPILKSIVTPYQNAFVPGRLI 559


>ref|XP_002443080.1| hypothetical protein SORBIDRAFT_08g007680 [Sorghum bicolor]
           gi|241943773|gb|EES16918.1| hypothetical protein
           SORBIDRAFT_08g007680 [Sorghum bicolor]
          Length = 649

 Score =  107 bits (266), Expect = 5e-21
 Identities = 52/104 (50%), Positives = 68/104 (65%)
 Frame = -3

Query: 318 NKSAGPDGFTGKFFHTY*DIIERDITNFIQQFYITAHFTKSLNHTNIVLIPKTKNPKQPT 139
           N + GPDGFT +F+  + D+I +++T  +  F         +NHT IVLIPKT+NP+  T
Sbjct: 4   NNAPGPDGFTARFYQLHWDLIGKEVTTAVLNFLNGGTLPADINHTTIVLIPKTRNPQGMT 63

Query: 138 HFRPIILCNVAYKILSKVIVNRLRPLLNKIICPFQSAFIPSRCI 7
            FRPI LCNV YKI SKV+  RLR  L++II   QSAF+P R I
Sbjct: 64  EFRPISLCNVLYKICSKVLALRLREFLDEIISEEQSAFVPGRLI 107


>ref|XP_002451844.1| hypothetical protein SORBIDRAFT_04g008547 [Sorghum bicolor]
           gi|241931675|gb|EES04820.1| hypothetical protein
           SORBIDRAFT_04g008547 [Sorghum bicolor]
          Length = 599

 Score =  105 bits (263), Expect = 1e-20
 Identities = 52/104 (50%), Positives = 67/104 (64%)
 Frame = -3

Query: 318 NKSAGPDGFTGKFFHTY*DIIERDITNFIQQFYITAHFTKSLNHTNIVLIPKTKNPKQPT 139
           NK+ GPDGFT  F+  + D++   IT  +  F    H  + +N T IVLIPK K+P+   
Sbjct: 463 NKAPGPDGFTAGFYQNHWDVVGPSITKAVIHFLNGGHMPEGINQTTIVLIPKVKHPQDLK 522

Query: 138 HFRPIILCNVAYKILSKVIVNRLRPLLNKIICPFQSAFIPSRCI 7
           +FRPI LCNV YKI SKV+ NRLR  L++II   QSAF+P R I
Sbjct: 523 NFRPISLCNVIYKICSKVLANRLRVFLDEIISEEQSAFVPGRLI 566