BLASTX nr result
ID: Coptis24_contig00028861
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00028861 (265 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004165322.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor... 129 3e-28 ref|XP_004136398.1| PREDICTED: ABC transporter B family member 2... 129 3e-28 gb|EEC73824.1| hypothetical protein OsI_08549 [Oryza sativa Indi... 124 6e-27 gb|AAF23176.1|AF216497_1 P-glycoprotein [Gossypium hirsutum] 124 8e-27 ref|XP_003572841.1| PREDICTED: ABC transporter B family member 2... 124 8e-27 >ref|XP_004165322.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter B family member 2-like, partial [Cucumis sativus] Length = 1158 Score = 129 bits (323), Expect = 3e-28 Identities = 58/78 (74%), Positives = 70/78 (89%) Frame = +2 Query: 5 GTIGAFVSGTQMPLFALGVSEALVAYYMDWDTTCREVRKIAIFFCGGAVATVFFYTMEHL 184 G IGAFV+G+QMPLFALGVS+ALVA+YMDWDTT E++KI++ FCGGAV TV F+ +EHL Sbjct: 597 GVIGAFVTGSQMPLFALGVSQALVAFYMDWDTTQHEIKKISLLFCGGAVLTVIFHAVEHL 656 Query: 185 CFGIMGERLTLRIRKEMF 238 CFGIMGERLTLR+R+ MF Sbjct: 657 CFGIMGERLTLRVREMMF 674 >ref|XP_004136398.1| PREDICTED: ABC transporter B family member 2-like [Cucumis sativus] Length = 1232 Score = 129 bits (323), Expect = 3e-28 Identities = 58/78 (74%), Positives = 70/78 (89%) Frame = +2 Query: 5 GTIGAFVSGTQMPLFALGVSEALVAYYMDWDTTCREVRKIAIFFCGGAVATVFFYTMEHL 184 G IGAFV+G+QMPLFALGVS+ALVA+YMDWDTT E++KI++ FCGGAV TV F+ +EHL Sbjct: 671 GVIGAFVTGSQMPLFALGVSQALVAFYMDWDTTQHEIKKISLLFCGGAVLTVIFHAVEHL 730 Query: 185 CFGIMGERLTLRIRKEMF 238 CFGIMGERLTLR+R+ MF Sbjct: 731 CFGIMGERLTLRVREMMF 748 >gb|EEC73824.1| hypothetical protein OsI_08549 [Oryza sativa Indica Group] Length = 1264 Score = 124 bits (312), Expect = 6e-27 Identities = 58/79 (73%), Positives = 70/79 (88%) Frame = +2 Query: 5 GTIGAFVSGTQMPLFALGVSEALVAYYMDWDTTCREVRKIAIFFCGGAVATVFFYTMEHL 184 GT+ AFV+G+QMPLFALGV++ALV+YYM W+TT REVRKIA+ FC GAV TV F+T+EHL Sbjct: 697 GTVSAFVAGSQMPLFALGVTQALVSYYMGWETTKREVRKIAVLFCCGAVLTVVFHTIEHL 756 Query: 185 CFGIMGERLTLRIRKEMFA 241 FGIMGERLTLR+R+ MFA Sbjct: 757 SFGIMGERLTLRVRERMFA 775 >gb|AAF23176.1|AF216497_1 P-glycoprotein [Gossypium hirsutum] Length = 1249 Score = 124 bits (311), Expect = 8e-27 Identities = 56/80 (70%), Positives = 68/80 (85%) Frame = +2 Query: 2 FGTIGAFVSGTQMPLFALGVSEALVAYYMDWDTTCREVRKIAIFFCGGAVATVFFYTMEH 181 FGT+ A ++G QMPLFALGVS+ALVAYYMDW+TTC EV+KIAI FC +V TV + +EH Sbjct: 686 FGTVTALIAGAQMPLFALGVSQALVAYYMDWETTCHEVKKIAILFCCASVITVIVHAIEH 745 Query: 182 LCFGIMGERLTLRIRKEMFA 241 LCFGIMGERLTLR+R+ MF+ Sbjct: 746 LCFGIMGERLTLRVREGMFS 765 >ref|XP_003572841.1| PREDICTED: ABC transporter B family member 2-like [Brachypodium distachyon] Length = 1256 Score = 124 bits (311), Expect = 8e-27 Identities = 59/79 (74%), Positives = 69/79 (87%) Frame = +2 Query: 5 GTIGAFVSGTQMPLFALGVSEALVAYYMDWDTTCREVRKIAIFFCGGAVATVFFYTMEHL 184 GTI AFV+G QMPLFALGV++ALV+YYM WDTT +EVRKIAI FC GAV TV F+ +EHL Sbjct: 688 GTISAFVAGAQMPLFALGVTQALVSYYMGWDTTKKEVRKIAILFCCGAVLTVIFHAIEHL 747 Query: 185 CFGIMGERLTLRIRKEMFA 241 FGIMGERLTLR+R++MFA Sbjct: 748 SFGIMGERLTLRVREKMFA 766