BLASTX nr result

ID: Coptis24_contig00028861 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028861
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165322.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...   129   3e-28
ref|XP_004136398.1| PREDICTED: ABC transporter B family member 2...   129   3e-28
gb|EEC73824.1| hypothetical protein OsI_08549 [Oryza sativa Indi...   124   6e-27
gb|AAF23176.1|AF216497_1 P-glycoprotein [Gossypium hirsutum]          124   8e-27
ref|XP_003572841.1| PREDICTED: ABC transporter B family member 2...   124   8e-27

>ref|XP_004165322.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter B family member
           2-like, partial [Cucumis sativus]
          Length = 1158

 Score =  129 bits (323), Expect = 3e-28
 Identities = 58/78 (74%), Positives = 70/78 (89%)
 Frame = +2

Query: 5   GTIGAFVSGTQMPLFALGVSEALVAYYMDWDTTCREVRKIAIFFCGGAVATVFFYTMEHL 184
           G IGAFV+G+QMPLFALGVS+ALVA+YMDWDTT  E++KI++ FCGGAV TV F+ +EHL
Sbjct: 597 GVIGAFVTGSQMPLFALGVSQALVAFYMDWDTTQHEIKKISLLFCGGAVLTVIFHAVEHL 656

Query: 185 CFGIMGERLTLRIRKEMF 238
           CFGIMGERLTLR+R+ MF
Sbjct: 657 CFGIMGERLTLRVREMMF 674


>ref|XP_004136398.1| PREDICTED: ABC transporter B family member 2-like [Cucumis sativus]
          Length = 1232

 Score =  129 bits (323), Expect = 3e-28
 Identities = 58/78 (74%), Positives = 70/78 (89%)
 Frame = +2

Query: 5   GTIGAFVSGTQMPLFALGVSEALVAYYMDWDTTCREVRKIAIFFCGGAVATVFFYTMEHL 184
           G IGAFV+G+QMPLFALGVS+ALVA+YMDWDTT  E++KI++ FCGGAV TV F+ +EHL
Sbjct: 671 GVIGAFVTGSQMPLFALGVSQALVAFYMDWDTTQHEIKKISLLFCGGAVLTVIFHAVEHL 730

Query: 185 CFGIMGERLTLRIRKEMF 238
           CFGIMGERLTLR+R+ MF
Sbjct: 731 CFGIMGERLTLRVREMMF 748


>gb|EEC73824.1| hypothetical protein OsI_08549 [Oryza sativa Indica Group]
          Length = 1264

 Score =  124 bits (312), Expect = 6e-27
 Identities = 58/79 (73%), Positives = 70/79 (88%)
 Frame = +2

Query: 5   GTIGAFVSGTQMPLFALGVSEALVAYYMDWDTTCREVRKIAIFFCGGAVATVFFYTMEHL 184
           GT+ AFV+G+QMPLFALGV++ALV+YYM W+TT REVRKIA+ FC GAV TV F+T+EHL
Sbjct: 697 GTVSAFVAGSQMPLFALGVTQALVSYYMGWETTKREVRKIAVLFCCGAVLTVVFHTIEHL 756

Query: 185 CFGIMGERLTLRIRKEMFA 241
            FGIMGERLTLR+R+ MFA
Sbjct: 757 SFGIMGERLTLRVRERMFA 775


>gb|AAF23176.1|AF216497_1 P-glycoprotein [Gossypium hirsutum]
          Length = 1249

 Score =  124 bits (311), Expect = 8e-27
 Identities = 56/80 (70%), Positives = 68/80 (85%)
 Frame = +2

Query: 2   FGTIGAFVSGTQMPLFALGVSEALVAYYMDWDTTCREVRKIAIFFCGGAVATVFFYTMEH 181
           FGT+ A ++G QMPLFALGVS+ALVAYYMDW+TTC EV+KIAI FC  +V TV  + +EH
Sbjct: 686 FGTVTALIAGAQMPLFALGVSQALVAYYMDWETTCHEVKKIAILFCCASVITVIVHAIEH 745

Query: 182 LCFGIMGERLTLRIRKEMFA 241
           LCFGIMGERLTLR+R+ MF+
Sbjct: 746 LCFGIMGERLTLRVREGMFS 765


>ref|XP_003572841.1| PREDICTED: ABC transporter B family member 2-like [Brachypodium
           distachyon]
          Length = 1256

 Score =  124 bits (311), Expect = 8e-27
 Identities = 59/79 (74%), Positives = 69/79 (87%)
 Frame = +2

Query: 5   GTIGAFVSGTQMPLFALGVSEALVAYYMDWDTTCREVRKIAIFFCGGAVATVFFYTMEHL 184
           GTI AFV+G QMPLFALGV++ALV+YYM WDTT +EVRKIAI FC GAV TV F+ +EHL
Sbjct: 688 GTISAFVAGAQMPLFALGVTQALVSYYMGWDTTKKEVRKIAILFCCGAVLTVIFHAIEHL 747

Query: 185 CFGIMGERLTLRIRKEMFA 241
            FGIMGERLTLR+R++MFA
Sbjct: 748 SFGIMGERLTLRVREKMFA 766


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