BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028832
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002865954.1| hypothetical protein ARALYDRAFT_918383 [Arab...   115   3e-24
ref|NP_200125.1| cyclic nucleotide-gated ion channel 1 [Arabidop...   115   4e-24
ref|XP_002268992.1| PREDICTED: cyclic nucleotide-gated ion chann...   111   5e-23
ref|XP_002317760.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
gb|AAF33670.1|AF079872_1 cyclic nucleotide-gated calmodulin-bind...   106   2e-21

>ref|XP_002865954.1| hypothetical protein ARALYDRAFT_918383 [Arabidopsis lyrata subsp.
           lyrata] gi|297311789|gb|EFH42213.1| hypothetical protein
           ARALYDRAFT_918383 [Arabidopsis lyrata subsp. lyrata]
          Length = 716

 Score =  115 bits (289), Expect = 3e-24
 Identities = 50/92 (54%), Positives = 66/92 (71%), Gaps = 2/92 (2%)
 Frame = +1

Query: 1   IYGALWYFFAVEREYICLRRACSNT-TTCNLSSLYCGVQSTGGNGYLEAKCPIIEPNKTL 177
           ++GA WY F++ERE +C ++AC  T ++C  S LYC  +  GGN +L   CPI  PN TL
Sbjct: 272 VFGAFWYLFSIERETVCWKQACEKTNSSCIPSLLYCDREIPGGNAFLNESCPIQTPNTTL 331

Query: 178 FDFGIYLDVLQSGILKS-SFPKKLMYCFWWGL 270
           FDFGI+LD LQSG+++S  FP+K  YCFWWGL
Sbjct: 332 FDFGIFLDALQSGVVESQDFPQKFFYCFWWGL 363


>ref|NP_200125.1| cyclic nucleotide-gated ion channel 1 [Arabidopsis thaliana]
           gi|38502855|sp|O65717.1|CNGC1_ARATH RecName: Full=Cyclic
           nucleotide-gated ion channel 1; Short=AtCNGC1; AltName:
           Full=Cyclic nucleotide- and calmodulin-regulated ion
           channel 1 gi|13877753|gb|AAK43954.1|AF370139_1 putative
           cyclic nucleotide-regulated ion channel protein
           [Arabidopsis thaliana] gi|3096947|emb|CAA76178.1|
           putative cyclic nucleotide-regulated ion channel
           [Arabidopsis thaliana] gi|9757994|dbj|BAB08416.1| cyclic
           nucleotide-regulated ion channel [Arabidopsis thaliana]
           gi|24030485|gb|AAN41391.1| putative cyclic
           nucleotide-regulated ion channel protein [Arabidopsis
           thaliana] gi|332008928|gb|AED96311.1| cyclic
           nucleotide-gated ion channel 1 [Arabidopsis thaliana]
          Length = 716

 Score =  115 bits (288), Expect = 4e-24
 Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 2/92 (2%)
 Frame = +1

Query: 1   IYGALWYFFAVEREYICLRRACS-NTTTCNLSSLYCGVQSTGGNGYLEAKCPIIEPNKTL 177
           ++GA WY F++ERE +C ++AC  N   C    LYC  ++ GGN +L   CPI  PN TL
Sbjct: 272 VFGAFWYLFSIERETVCWKQACERNNPPCISKLLYCDPETAGGNAFLNESCPIQTPNTTL 331

Query: 178 FDFGIYLDVLQSGILKS-SFPKKLMYCFWWGL 270
           FDFGI+LD LQSG+++S  FP+K  YCFWWGL
Sbjct: 332 FDFGIFLDALQSGVVESQDFPQKFFYCFWWGL 363


>ref|XP_002268992.1| PREDICTED: cyclic nucleotide-gated ion channel 1 [Vitis vinifera]
           gi|302143681|emb|CBI22542.3| unnamed protein product
           [Vitis vinifera]
          Length = 709

 Score =  111 bits (278), Expect = 5e-23
 Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 1/91 (1%)
 Frame = +1

Query: 1   IYGALWYFFAVEREYICLRRACSNTTTCNLSSLYCGVQSTGGNGYLEAKCPIIEPNKTLF 180
           + GA WY FA++RE  C  +AC N T+C  SSLYC  + T       A CP+IEPN T+F
Sbjct: 269 VLGAFWYLFAIDRETTCWTKACGNDTSCIDSSLYC--KGTVNTTLFNASCPVIEPNTTVF 326

Query: 181 DFGIYLDVLQSGILKSS-FPKKLMYCFWWGL 270
           DFGI LD LQSG+++S+ FP+K  YCFWWGL
Sbjct: 327 DFGILLDALQSGVVESTDFPQKFFYCFWWGL 357


>ref|XP_002317760.1| predicted protein [Populus trichocarpa] gi|222858433|gb|EEE95980.1|
           predicted protein [Populus trichocarpa]
          Length = 709

 Score =  106 bits (265), Expect = 2e-21
 Identities = 47/93 (50%), Positives = 63/93 (67%), Gaps = 3/93 (3%)
 Frame = +1

Query: 1   IYGALWYFFAVEREYICLRRACSNTTTCNLSSLYCGVQSTGGN-GYLEAKCPIIEPNKTL 177
           + GA WY F++ERE  C R+AC     C+   L+C    + GN  +L+  CPII PN+T+
Sbjct: 266 VLGAFWYLFSIERETNCWRQACGKHAGCSRELLFCDTAGSVGNLSFLDNYCPIITPNETV 325

Query: 178 FDFGIYLDVLQSGILKSS--FPKKLMYCFWWGL 270
           F+FGI+LD LQSG++ SS  FP+K  YCFWWGL
Sbjct: 326 FNFGIFLDALQSGVVSSSMDFPQKFFYCFWWGL 358


>gb|AAF33670.1|AF079872_1 cyclic nucleotide-gated calmodulin-binding ion channel [Nicotiana
           tabacum]
          Length = 708

 Score =  106 bits (264), Expect = 2e-21
 Identities = 46/91 (50%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
 Frame = +1

Query: 1   IYGALWYFFAVEREYICLRRACSNTTTCNLSSLYCGVQSTGGNGYLEAKCPIIEPNKTLF 180
           + GA WY F++ERE  C ++AC N++ C+ +SLYC    T     L + CPI  PN TLF
Sbjct: 266 VLGAFWYLFSIERETTCWKQACGNSSPCHHASLYCDDDHTKFKTLLNSSCPIETPNATLF 325

Query: 181 DFGIYLDVLQSGIL-KSSFPKKLMYCFWWGL 270
           DFGI+L  LQSG++    FP+K  YCFWWGL
Sbjct: 326 DFGIFLGALQSGVVGPMDFPQKFFYCFWWGL 356