BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028804
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat...   218   4e-55
emb|CBI30291.3| unnamed protein product [Vitis vinifera]              218   4e-55
emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]   216   2e-54
ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containi...   211   5e-53
ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containi...   184   5e-45

>ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Vitis vinifera]
          Length = 681

 Score =  218 bits (555), Expect = 4e-55
 Identities = 96/134 (71%), Positives = 115/134 (85%)
 Frame = +2

Query: 2   GKCGLIDSSVQVFDRVKDPTGIAWNSLVGVFAQHGLGRDAVRIFEQMTCKGVKPNEITFV 181
           GKCGL++ ++Q FD + DPT IAWNSLV VF QHGLG+DA++IFE+M  +GVKPN ITF+
Sbjct: 355 GKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFI 414

Query: 182 NILRGCSHNGLVEEGLEYFNSMGKVYGVAPRPEHYSCVIDLLGRAGRLDQAEEFINKMPY 361
           ++L GCSH GLVEEGL+YF SM K YGV P  EHYSCVIDLLGRAGRL +A+EFIN+MP+
Sbjct: 415 SLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPF 474

Query: 362 EPNAFGWCSYLGAC 403
           EPNAFGWCS+LGAC
Sbjct: 475 EPNAFGWCSFLGAC 488


>emb|CBI30291.3| unnamed protein product [Vitis vinifera]
          Length = 616

 Score =  218 bits (555), Expect = 4e-55
 Identities = 96/134 (71%), Positives = 115/134 (85%)
 Frame = +2

Query: 2   GKCGLIDSSVQVFDRVKDPTGIAWNSLVGVFAQHGLGRDAVRIFEQMTCKGVKPNEITFV 181
           GKCGL++ ++Q FD + DPT IAWNSLV VF QHGLG+DA++IFE+M  +GVKPN ITF+
Sbjct: 290 GKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFI 349

Query: 182 NILRGCSHNGLVEEGLEYFNSMGKVYGVAPRPEHYSCVIDLLGRAGRLDQAEEFINKMPY 361
           ++L GCSH GLVEEGL+YF SM K YGV P  EHYSCVIDLLGRAGRL +A+EFIN+MP+
Sbjct: 350 SLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPF 409

Query: 362 EPNAFGWCSYLGAC 403
           EPNAFGWCS+LGAC
Sbjct: 410 EPNAFGWCSFLGAC 423


>emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
          Length = 681

 Score =  216 bits (550), Expect = 2e-54
 Identities = 95/134 (70%), Positives = 114/134 (85%)
 Frame = +2

Query: 2   GKCGLIDSSVQVFDRVKDPTGIAWNSLVGVFAQHGLGRDAVRIFEQMTCKGVKPNEITFV 181
           GKCGL++ ++Q FD + DPT IAWNSLV VF QHGLG+DA++ FE+M  +GVKPN ITF+
Sbjct: 355 GKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFI 414

Query: 182 NILRGCSHNGLVEEGLEYFNSMGKVYGVAPRPEHYSCVIDLLGRAGRLDQAEEFINKMPY 361
           ++L GCSH GLVEEGL+YF SM K YGV P  EHYSCVIDLLGRAGRL +A+EFIN+MP+
Sbjct: 415 SLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPF 474

Query: 362 EPNAFGWCSYLGAC 403
           EPNAFGWCS+LGAC
Sbjct: 475 EPNAFGWCSFLGAC 488


>ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 751

 Score =  211 bits (537), Expect = 5e-53
 Identities = 90/134 (67%), Positives = 114/134 (85%)
 Frame = +2

Query: 2   GKCGLIDSSVQVFDRVKDPTGIAWNSLVGVFAQHGLGRDAVRIFEQMTCKGVKPNEITFV 181
           GKCGL D S+Q+FD +++P  IAWN+LVGVF+QHGLGR+A+  F  M  +G+KPN +TFV
Sbjct: 425 GKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFV 484

Query: 182 NILRGCSHNGLVEEGLEYFNSMGKVYGVAPRPEHYSCVIDLLGRAGRLDQAEEFINKMPY 361
           N+L+GCSH G+VE+GL YF+SM K+YGV P+ EHYSCVIDLLGRAG+L +AE+FIN MP+
Sbjct: 485 NLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPF 544

Query: 362 EPNAFGWCSYLGAC 403
           EPN FGWCS+LGAC
Sbjct: 545 EPNVFGWCSFLGAC 558


>ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 695

 Score =  184 bits (468), Expect = 5e-45
 Identities = 80/134 (59%), Positives = 106/134 (79%)
 Frame = +2

Query: 2   GKCGLIDSSVQVFDRVKDPTGIAWNSLVGVFAQHGLGRDAVRIFEQMTCKGVKPNEITFV 181
           GKCGLI  S+Q+F  ++  T IAWN+ + V AQHG GR+A+R F++MT  G++PN ITFV
Sbjct: 369 GKCGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFV 428

Query: 182 NILRGCSHNGLVEEGLEYFNSMGKVYGVAPRPEHYSCVIDLLGRAGRLDQAEEFINKMPY 361
           ++L  CSH GLV+EGL+YF SM   +G+ P+ EHYSC+ID+ GRAGRLD+AE+FI +MP 
Sbjct: 429 SLLTACSHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPV 488

Query: 362 EPNAFGWCSYLGAC 403
           +PNA+GWCS LGAC
Sbjct: 489 KPNAYGWCSLLGAC 502