BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028790
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_006666026.1| photosystem II CP43 chlorophyll apoprotein (...   106   2e-21
gb|AFA27422.1| photosystem II CP43 chlorophyll apoprotein, parti...   106   2e-21
ref|YP_003434340.1| photosystem II CP43 chlorophyll apoprotein [...   106   2e-21
ref|YP_002836086.1| photosystem II CP43 chlorophyll apoprotein [...   106   2e-21
ref|YP_001671679.2| photosystem II 44 kDa protein [Carica papaya]     106   2e-21

>ref|YP_006666026.1| photosystem II CP43 chlorophyll apoprotein (chloroplast) [Capsicum
           annuum] gi|401065928|gb|AFP90772.1| photosystem II CP43
           chlorophyll apoprotein (chloroplast) [Capsicum annuum]
          Length = 461

 Score =  106 bits (265), Expect = 2e-21
 Identities = 54/77 (70%), Positives = 54/77 (70%)
 Frame = +2

Query: 2   THAPLGSLNSVGGVATEINAVNYVSPRSWLATSXXXXXXXXXXXXXWHXXXXXXXXXXFE 181
           THAPLGSLNSVGGVATEINAVNYVSPRSWLATS             WH          FE
Sbjct: 385 THAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFFFVGHLWHAGRARAAAAGFE 444

Query: 182 KGIDRDLEPVLFMTPLN 232
           KGIDRDLEPVLFMTPLN
Sbjct: 445 KGIDRDLEPVLFMTPLN 461


>gb|AFA27422.1| photosystem II CP43 chlorophyll apoprotein, partial [Cyperus
           alternifolius]
          Length = 486

 Score =  106 bits (265), Expect = 2e-21
 Identities = 54/77 (70%), Positives = 54/77 (70%)
 Frame = +2

Query: 2   THAPLGSLNSVGGVATEINAVNYVSPRSWLATSXXXXXXXXXXXXXWHXXXXXXXXXXFE 181
           THAPLGSLNSVGGVATEINAVNYVSPRSWLATS             WH          FE
Sbjct: 410 THAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFFFVGHLWHAGRARAAAAGFE 469

Query: 182 KGIDRDLEPVLFMTPLN 232
           KGIDRDLEPVLFMTPLN
Sbjct: 470 KGIDRDLEPVLFMTPLN 486


>ref|YP_003434340.1| photosystem II CP43 chlorophyll apoprotein [Vigna radiata]
           gi|259020009|gb|ACV90207.1| photosystem II CP43
           chlorophyll apoprotein [Vigna radiata]
          Length = 473

 Score =  106 bits (265), Expect = 2e-21
 Identities = 54/77 (70%), Positives = 54/77 (70%)
 Frame = +2

Query: 2   THAPLGSLNSVGGVATEINAVNYVSPRSWLATSXXXXXXXXXXXXXWHXXXXXXXXXXFE 181
           THAPLGSLNSVGGVATEINAVNYVSPRSWLATS             WH          FE
Sbjct: 397 THAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFE 456

Query: 182 KGIDRDLEPVLFMTPLN 232
           KGIDRDLEPVLFMTPLN
Sbjct: 457 KGIDRDLEPVLFMTPLN 473


>ref|YP_002836086.1| photosystem II CP43 chlorophyll apoprotein [Megaleranthis
           saniculifolia] gi|226933878|gb|ACO92011.1| photosystem
           II CP43 chlorophyll apoprotein [Megaleranthis
           saniculifolia]
          Length = 473

 Score =  106 bits (265), Expect = 2e-21
 Identities = 54/77 (70%), Positives = 54/77 (70%)
 Frame = +2

Query: 2   THAPLGSLNSVGGVATEINAVNYVSPRSWLATSXXXXXXXXXXXXXWHXXXXXXXXXXFE 181
           THAPLGSLNSVGGVATEINAVNYVSPRSWLATS             WH          FE
Sbjct: 397 THAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFE 456

Query: 182 KGIDRDLEPVLFMTPLN 232
           KGIDRDLEPVLFMTPLN
Sbjct: 457 KGIDRDLEPVLFMTPLN 473


>ref|YP_001671679.2| photosystem II 44 kDa protein [Carica papaya]
          Length = 461

 Score =  106 bits (265), Expect = 2e-21
 Identities = 54/77 (70%), Positives = 54/77 (70%)
 Frame = +2

Query: 2   THAPLGSLNSVGGVATEINAVNYVSPRSWLATSXXXXXXXXXXXXXWHXXXXXXXXXXFE 181
           THAPLGSLNSVGGVATEINAVNYVSPRSWLATS             WH          FE
Sbjct: 385 THAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFE 444

Query: 182 KGIDRDLEPVLFMTPLN 232
           KGIDRDLEPVLFMTPLN
Sbjct: 445 KGIDRDLEPVLFMTPLN 461