BLASTX nr result
ID: Coptis24_contig00028738
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00028738 (409 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004165243.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor... 68 9e-10 ref|XP_004151184.1| PREDICTED: ABC transporter G family member 3... 68 9e-10 gb|ACU82514.1| pleiotropic drug resistance protein [Cucumis sati... 68 9e-10 ref|XP_002303308.1| predicted protein [Populus trichocarpa] gi|2... 65 6e-09 gb|ACJ86311.1| unknown [Medicago truncatula] 64 2e-08 >ref|XP_004165243.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter G family member 36-like [Cucumis sativus] Length = 1475 Score = 67.8 bits (164), Expect = 9e-10 Identities = 33/56 (58%), Positives = 42/56 (75%), Gaps = 2/56 (3%) Frame = -2 Query: 162 RASQRMSTSISRNMSKTNWGMEDVFVS--TSRKSIAINEDEEALVWAALEKLPTYD 1 R S+ S SISR+ S+ +W MEDVF + SR+S ++EDEEAL WAA+EKLPTYD Sbjct: 4 RTSRNFSRSISRSFSRASWSMEDVFANGNPSRRSSRVDEDEEALRWAAIEKLPTYD 59 >ref|XP_004151184.1| PREDICTED: ABC transporter G family member 36-like [Cucumis sativus] Length = 1475 Score = 67.8 bits (164), Expect = 9e-10 Identities = 33/56 (58%), Positives = 42/56 (75%), Gaps = 2/56 (3%) Frame = -2 Query: 162 RASQRMSTSISRNMSKTNWGMEDVFVS--TSRKSIAINEDEEALVWAALEKLPTYD 1 R S+ S SISR+ S+ +W MEDVF + SR+S ++EDEEAL WAA+EKLPTYD Sbjct: 4 RTSRNFSRSISRSFSRASWSMEDVFANGNPSRRSSRVDEDEEALRWAAIEKLPTYD 59 >gb|ACU82514.1| pleiotropic drug resistance protein [Cucumis sativus] Length = 1475 Score = 67.8 bits (164), Expect = 9e-10 Identities = 33/56 (58%), Positives = 42/56 (75%), Gaps = 2/56 (3%) Frame = -2 Query: 162 RASQRMSTSISRNMSKTNWGMEDVFVS--TSRKSIAINEDEEALVWAALEKLPTYD 1 R S+ S SISR+ S+ +W MEDVF + SR+S ++EDEEAL WAA+EKLPTYD Sbjct: 4 RTSRNFSRSISRSFSRASWSMEDVFANGNPSRRSSRVDEDEEALRWAAIEKLPTYD 59 >ref|XP_002303308.1| predicted protein [Populus trichocarpa] gi|222840740|gb|EEE78287.1| predicted protein [Populus trichocarpa] Length = 1448 Score = 65.1 bits (157), Expect = 6e-09 Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 3/69 (4%) Frame = -2 Query: 198 MDGLERVWSSGMRASQR-MSTSISRNMSKTNWGMEDVFVS--TSRKSIAINEDEEALVWA 28 MDG E+ +SG R+S +S SISR++ + W M+DVF + SR++ ++ DEEAL WA Sbjct: 1 MDGEEKARASGRRSSHSSLSRSISRSLIRAGWNMDDVFSAGRDSRRTSLVDGDEEALKWA 60 Query: 27 ALEKLPTYD 1 A+EKLPTY+ Sbjct: 61 AIEKLPTYN 69 >gb|ACJ86311.1| unknown [Medicago truncatula] Length = 128 Score = 63.5 bits (153), Expect = 2e-08 Identities = 30/51 (58%), Positives = 42/51 (82%), Gaps = 2/51 (3%) Frame = -2 Query: 147 MSTSISRNMSKTNWGMEDVFVST--SRKSIAINEDEEALVWAALEKLPTYD 1 +S SISR++S+++W ME+VF S SR++ ++EDEEAL WAA+EKLPTYD Sbjct: 5 LSRSISRSLSRSSWKMEEVFASGRYSRRTSQVDEDEEALKWAAIEKLPTYD 55