BLASTX nr result

ID: Coptis24_contig00028683 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028683
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300807.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-38
gb|AFK33699.1| unknown [Lotus japonicus]                              161   4e-38
ref|XP_002307623.1| predicted protein [Populus trichocarpa] gi|2...   160   8e-38
ref|NP_192170.1| tryptophan synthase alpha chain [Arabidopsis th...   158   4e-37
gb|ACJ02769.1| indole-3-glycerol phosphate lyase BX1 [Consolida ...   158   4e-37

>ref|XP_002300807.1| predicted protein [Populus trichocarpa] gi|222842533|gb|EEE80080.1|
           predicted protein [Populus trichocarpa]
          Length = 310

 Score =  162 bits (409), Expect = 3e-38
 Identities = 82/99 (82%), Positives = 91/99 (91%)
 Frame = +2

Query: 2   EAAEGFVYLVSSVGVTGARASVNPRVQSLLHEIKEVTSKPVTVGFGISKPEHVQQIARWG 181
           EAA+GFVYLVSSVGVTGARASV+ RVQ+LL +IKE T+KPV VGFGISKPEHV+Q+A WG
Sbjct: 212 EAADGFVYLVSSVGVTGARASVSDRVQTLLRDIKESTTKPVAVGFGISKPEHVKQVAAWG 271

Query: 182 ADGVIVGSALVKLLGEANSPVEGLKELEIFTKSLKSALP 298
           ADGVIVGSA+VKLLGEA SP EGLKELE FTKSLK+ALP
Sbjct: 272 ADGVIVGSAMVKLLGEAKSPEEGLKELESFTKSLKAALP 310


>gb|AFK33699.1| unknown [Lotus japonicus]
          Length = 311

 Score =  161 bits (408), Expect = 4e-38
 Identities = 81/99 (81%), Positives = 91/99 (91%)
 Frame = +2

Query: 2   EAAEGFVYLVSSVGVTGARASVNPRVQSLLHEIKEVTSKPVTVGFGISKPEHVQQIARWG 181
           +AAEGFVYLVSSVGVTGARASV+ +VQ+LL EIKE TSKPV VGFGISKPEHV+Q+A WG
Sbjct: 213 DAAEGFVYLVSSVGVTGARASVSDKVQALLQEIKEATSKPVAVGFGISKPEHVEQVAGWG 272

Query: 182 ADGVIVGSALVKLLGEANSPVEGLKELEIFTKSLKSALP 298
           ADGVIVGSA+VK+LG+A SP EGLKELE FT+SLKSALP
Sbjct: 273 ADGVIVGSAMVKILGDAKSPQEGLKELENFTRSLKSALP 311


>ref|XP_002307623.1| predicted protein [Populus trichocarpa] gi|222857072|gb|EEE94619.1|
           predicted protein [Populus trichocarpa]
          Length = 310

 Score =  160 bits (406), Expect = 8e-38
 Identities = 81/99 (81%), Positives = 90/99 (90%)
 Frame = +2

Query: 2   EAAEGFVYLVSSVGVTGARASVNPRVQSLLHEIKEVTSKPVTVGFGISKPEHVQQIARWG 181
           EAA+GFVYLVSSVGVTG RASV+ RVQ+LL +IKE T+KPV VGFGISKPEHV+Q+A WG
Sbjct: 212 EAADGFVYLVSSVGVTGTRASVSDRVQTLLQDIKETTTKPVAVGFGISKPEHVKQVAGWG 271

Query: 182 ADGVIVGSALVKLLGEANSPVEGLKELEIFTKSLKSALP 298
           ADGVIVGSA+VKLLGEA SP EGLKELE FTKSLK+ALP
Sbjct: 272 ADGVIVGSAMVKLLGEAKSPEEGLKELESFTKSLKAALP 310


>ref|NP_192170.1| tryptophan synthase alpha chain [Arabidopsis thaliana]
           gi|75097570|sp|O22765.2|TRPA1_ARATH RecName:
           Full=Tryptophan synthase alpha chain; AltName:
           Full=Indole synthase; AltName:
           Full=Indole-3-glycerol-phosphate lyase
           gi|3892048|gb|AAC78257.1| putative tryptophan synthase
           alpha 1-like protein [Arabidopsis thaliana]
           gi|7269021|emb|CAB80754.1| tryptophan synthase alpha
           1-like protein [Arabidopsis thaliana]
           gi|26450413|dbj|BAC42321.1| putative tryptophan synthase
           alpha 1 [Arabidopsis thaliana]
           gi|29824243|gb|AAP04082.1| putative tryptophan synthase
           alpha 1 chain [Arabidopsis thaliana]
           gi|332656804|gb|AEE82204.1| tryptophan synthase alpha
           chain [Arabidopsis thaliana]
          Length = 275

 Score =  158 bits (400), Expect = 4e-37
 Identities = 78/98 (79%), Positives = 88/98 (89%)
 Frame = +2

Query: 2   EAAEGFVYLVSSVGVTGARASVNPRVQSLLHEIKEVTSKPVTVGFGISKPEHVQQIARWG 181
           EA+EGF+YLVSSVGVTG R SVN +VQSLL +IKE TSKPV VGFGISKPEHV+Q+A WG
Sbjct: 176 EASEGFIYLVSSVGVTGTRESVNEKVQSLLQQIKEATSKPVAVGFGISKPEHVKQVAEWG 235

Query: 182 ADGVIVGSALVKLLGEANSPVEGLKELEIFTKSLKSAL 295
           ADGVIVGSA+VK+LGE+ SP +GLKELE FTKSLKSAL
Sbjct: 236 ADGVIVGSAMVKILGESESPEQGLKELEFFTKSLKSAL 273


>gb|ACJ02769.1| indole-3-glycerol phosphate lyase BX1 [Consolida orientalis]
          Length = 315

 Score =  158 bits (400), Expect = 4e-37
 Identities = 81/98 (82%), Positives = 88/98 (89%)
 Frame = +2

Query: 2   EAAEGFVYLVSSVGVTGARASVNPRVQSLLHEIKEVTSKPVTVGFGISKPEHVQQIARWG 181
           + A+GFVYLVSSVGVTGAR SVNPRVQSLL E KEVT+KPV VGFGISKPEHV+QIARWG
Sbjct: 209 QVAQGFVYLVSSVGVTGARPSVNPRVQSLLQEXKEVTNKPVVVGFGISKPEHVKQIARWG 268

Query: 182 ADGVIVGSALVKLLGEANSPVEGLKELEIFTKSLKSAL 295
           ADGVIVGSA+VKLLGEA +  EGLKELE FT SLK+AL
Sbjct: 269 ADGVIVGSAMVKLLGEAKTANEGLKELEAFTMSLKTAL 306


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