BLASTX nr result

ID: Coptis24_contig00028640 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028640
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274010.1| PREDICTED: cellulose synthase-like protein D...   179   2e-43
ref|XP_004152235.1| PREDICTED: cellulose synthase-like protein D...   173   1e-41
gb|AFZ78586.1| cellulose synthase-like protein [Populus tomentosa]    172   2e-41
ref|XP_002320989.1| predicted protein [Populus trichocarpa] gi|2...   172   2e-41
ref|XP_002301494.1| predicted protein [Populus trichocarpa] gi|2...   171   6e-41

>ref|XP_002274010.1| PREDICTED: cellulose synthase-like protein D5-like [Vitis vinifera]
          Length = 1171

 Score =  179 bits (455), Expect = 2e-43
 Identities = 80/94 (85%), Positives = 88/94 (93%)
 Frame = -1

Query: 284 TYGYGNAVWPRDEFGSGSGVNGFEYPPDFGERCRRPLTRKVFVSAAILSPYRLLMVIRLV 105
           TYGYGNAVWP+D +G GSGVNGFE+PPDFGE+ RRPLTRKV VSAAI+SPYRLL+++RLV
Sbjct: 262 TYGYGNAVWPKDGYGFGSGVNGFEHPPDFGEKTRRPLTRKVNVSAAIISPYRLLVLLRLV 321

Query: 104 ALGFFLTWRIRHPNRDAMWLWGMSIVCELWFAFS 3
           ALGFFLTWRIRHPNRDAMWLWGMSI CELWFA S
Sbjct: 322 ALGFFLTWRIRHPNRDAMWLWGMSITCELWFALS 355


>ref|XP_004152235.1| PREDICTED: cellulose synthase-like protein D5-like [Cucumis
           sativus] gi|449531183|ref|XP_004172567.1| PREDICTED:
           cellulose synthase-like protein D5-like [Cucumis
           sativus]
          Length = 1169

 Score =  173 bits (438), Expect = 1e-41
 Identities = 75/94 (79%), Positives = 85/94 (90%)
 Frame = -1

Query: 284 TYGYGNAVWPRDEFGSGSGVNGFEYPPDFGERCRRPLTRKVFVSAAILSPYRLLMVIRLV 105
           TYGYGNAVWP+D +G GSG NGF++PPDFGE+ RRPLTRKV VSAAILSPYRLL++IRLV
Sbjct: 257 TYGYGNAVWPKDGYGFGSGANGFDHPPDFGEKSRRPLTRKVSVSAAILSPYRLLIIIRLV 316

Query: 104 ALGFFLTWRIRHPNRDAMWLWGMSIVCELWFAFS 3
           ALGFFLTWR+RHPN +A+WLWGMSI CELWF  S
Sbjct: 317 ALGFFLTWRVRHPNHEALWLWGMSITCELWFGLS 350


>gb|AFZ78586.1| cellulose synthase-like protein [Populus tomentosa]
          Length = 1166

 Score =  172 bits (437), Expect = 2e-41
 Identities = 78/94 (82%), Positives = 84/94 (89%)
 Frame = -1

Query: 284 TYGYGNAVWPRDEFGSGSGVNGFEYPPDFGERCRRPLTRKVFVSAAILSPYRLLMVIRLV 105
           TYGYGNAVWP+D +G+GSG NGFE PPDFGER RRPLTRKV VSAAILSPYRLL++IRL 
Sbjct: 256 TYGYGNAVWPKDGYGAGSGANGFEPPPDFGERSRRPLTRKVGVSAAILSPYRLLIMIRLA 315

Query: 104 ALGFFLTWRIRHPNRDAMWLWGMSIVCELWFAFS 3
           ALG FLTWRIRHPNR+AMWLWGMSI CELWF  S
Sbjct: 316 ALGLFLTWRIRHPNREAMWLWGMSITCELWFGVS 349


>ref|XP_002320989.1| predicted protein [Populus trichocarpa] gi|222861762|gb|EEE99304.1|
           predicted protein [Populus trichocarpa]
          Length = 1138

 Score =  172 bits (437), Expect = 2e-41
 Identities = 78/94 (82%), Positives = 84/94 (89%)
 Frame = -1

Query: 284 TYGYGNAVWPRDEFGSGSGVNGFEYPPDFGERCRRPLTRKVFVSAAILSPYRLLMVIRLV 105
           TYGYGNAVWP+D +G+GSG NGFE PPDFGER RRPLTRKV VSAAILSPYRLL++IRL 
Sbjct: 228 TYGYGNAVWPKDGYGAGSGANGFEPPPDFGERSRRPLTRKVGVSAAILSPYRLLIMIRLA 287

Query: 104 ALGFFLTWRIRHPNRDAMWLWGMSIVCELWFAFS 3
           ALG FLTWRIRHPNR+AMWLWGMSI CELWF  S
Sbjct: 288 ALGLFLTWRIRHPNREAMWLWGMSITCELWFGVS 321


>ref|XP_002301494.1| predicted protein [Populus trichocarpa] gi|222843220|gb|EEE80767.1|
           predicted protein [Populus trichocarpa]
          Length = 1165

 Score =  171 bits (433), Expect = 6e-41
 Identities = 78/94 (82%), Positives = 84/94 (89%)
 Frame = -1

Query: 284 TYGYGNAVWPRDEFGSGSGVNGFEYPPDFGERCRRPLTRKVFVSAAILSPYRLLMVIRLV 105
           TYGYGNAVWP+D +G GSG NGFE PP+FGER RRPLTRKV VSAAILSPYRLL+VIRLV
Sbjct: 258 TYGYGNAVWPKDGYGVGSGGNGFEQPPEFGERSRRPLTRKVKVSAAILSPYRLLIVIRLV 317

Query: 104 ALGFFLTWRIRHPNRDAMWLWGMSIVCELWFAFS 3
           ALG FL WRIRHPNR+AMWLWGMSI CE+WFA S
Sbjct: 318 ALGLFLAWRIRHPNREAMWLWGMSITCEVWFALS 351


Top