BLASTX nr result
ID: Coptis24_contig00028640
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00028640 (284 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002274010.1| PREDICTED: cellulose synthase-like protein D... 179 2e-43 ref|XP_004152235.1| PREDICTED: cellulose synthase-like protein D... 173 1e-41 gb|AFZ78586.1| cellulose synthase-like protein [Populus tomentosa] 172 2e-41 ref|XP_002320989.1| predicted protein [Populus trichocarpa] gi|2... 172 2e-41 ref|XP_002301494.1| predicted protein [Populus trichocarpa] gi|2... 171 6e-41 >ref|XP_002274010.1| PREDICTED: cellulose synthase-like protein D5-like [Vitis vinifera] Length = 1171 Score = 179 bits (455), Expect = 2e-43 Identities = 80/94 (85%), Positives = 88/94 (93%) Frame = -1 Query: 284 TYGYGNAVWPRDEFGSGSGVNGFEYPPDFGERCRRPLTRKVFVSAAILSPYRLLMVIRLV 105 TYGYGNAVWP+D +G GSGVNGFE+PPDFGE+ RRPLTRKV VSAAI+SPYRLL+++RLV Sbjct: 262 TYGYGNAVWPKDGYGFGSGVNGFEHPPDFGEKTRRPLTRKVNVSAAIISPYRLLVLLRLV 321 Query: 104 ALGFFLTWRIRHPNRDAMWLWGMSIVCELWFAFS 3 ALGFFLTWRIRHPNRDAMWLWGMSI CELWFA S Sbjct: 322 ALGFFLTWRIRHPNRDAMWLWGMSITCELWFALS 355 >ref|XP_004152235.1| PREDICTED: cellulose synthase-like protein D5-like [Cucumis sativus] gi|449531183|ref|XP_004172567.1| PREDICTED: cellulose synthase-like protein D5-like [Cucumis sativus] Length = 1169 Score = 173 bits (438), Expect = 1e-41 Identities = 75/94 (79%), Positives = 85/94 (90%) Frame = -1 Query: 284 TYGYGNAVWPRDEFGSGSGVNGFEYPPDFGERCRRPLTRKVFVSAAILSPYRLLMVIRLV 105 TYGYGNAVWP+D +G GSG NGF++PPDFGE+ RRPLTRKV VSAAILSPYRLL++IRLV Sbjct: 257 TYGYGNAVWPKDGYGFGSGANGFDHPPDFGEKSRRPLTRKVSVSAAILSPYRLLIIIRLV 316 Query: 104 ALGFFLTWRIRHPNRDAMWLWGMSIVCELWFAFS 3 ALGFFLTWR+RHPN +A+WLWGMSI CELWF S Sbjct: 317 ALGFFLTWRVRHPNHEALWLWGMSITCELWFGLS 350 >gb|AFZ78586.1| cellulose synthase-like protein [Populus tomentosa] Length = 1166 Score = 172 bits (437), Expect = 2e-41 Identities = 78/94 (82%), Positives = 84/94 (89%) Frame = -1 Query: 284 TYGYGNAVWPRDEFGSGSGVNGFEYPPDFGERCRRPLTRKVFVSAAILSPYRLLMVIRLV 105 TYGYGNAVWP+D +G+GSG NGFE PPDFGER RRPLTRKV VSAAILSPYRLL++IRL Sbjct: 256 TYGYGNAVWPKDGYGAGSGANGFEPPPDFGERSRRPLTRKVGVSAAILSPYRLLIMIRLA 315 Query: 104 ALGFFLTWRIRHPNRDAMWLWGMSIVCELWFAFS 3 ALG FLTWRIRHPNR+AMWLWGMSI CELWF S Sbjct: 316 ALGLFLTWRIRHPNREAMWLWGMSITCELWFGVS 349 >ref|XP_002320989.1| predicted protein [Populus trichocarpa] gi|222861762|gb|EEE99304.1| predicted protein [Populus trichocarpa] Length = 1138 Score = 172 bits (437), Expect = 2e-41 Identities = 78/94 (82%), Positives = 84/94 (89%) Frame = -1 Query: 284 TYGYGNAVWPRDEFGSGSGVNGFEYPPDFGERCRRPLTRKVFVSAAILSPYRLLMVIRLV 105 TYGYGNAVWP+D +G+GSG NGFE PPDFGER RRPLTRKV VSAAILSPYRLL++IRL Sbjct: 228 TYGYGNAVWPKDGYGAGSGANGFEPPPDFGERSRRPLTRKVGVSAAILSPYRLLIMIRLA 287 Query: 104 ALGFFLTWRIRHPNRDAMWLWGMSIVCELWFAFS 3 ALG FLTWRIRHPNR+AMWLWGMSI CELWF S Sbjct: 288 ALGLFLTWRIRHPNREAMWLWGMSITCELWFGVS 321 >ref|XP_002301494.1| predicted protein [Populus trichocarpa] gi|222843220|gb|EEE80767.1| predicted protein [Populus trichocarpa] Length = 1165 Score = 171 bits (433), Expect = 6e-41 Identities = 78/94 (82%), Positives = 84/94 (89%) Frame = -1 Query: 284 TYGYGNAVWPRDEFGSGSGVNGFEYPPDFGERCRRPLTRKVFVSAAILSPYRLLMVIRLV 105 TYGYGNAVWP+D +G GSG NGFE PP+FGER RRPLTRKV VSAAILSPYRLL+VIRLV Sbjct: 258 TYGYGNAVWPKDGYGVGSGGNGFEQPPEFGERSRRPLTRKVKVSAAILSPYRLLIVIRLV 317 Query: 104 ALGFFLTWRIRHPNRDAMWLWGMSIVCELWFAFS 3 ALG FL WRIRHPNR+AMWLWGMSI CE+WFA S Sbjct: 318 ALGLFLAWRIRHPNREAMWLWGMSITCEVWFALS 351