BLASTX nr result

ID: Coptis24_contig00028604 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028604
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15393.3| unnamed protein product [Vitis vinifera]               90   9e-19
ref|XP_002274809.1| PREDICTED: wall-associated receptor kinase-l...    90   9e-19
ref|XP_002304840.1| predicted protein [Populus trichocarpa] gi|2...    88   1e-18
ref|NP_173063.1| wall-associated receptor kinase-like 1 [Arabido...    87   2e-18
sp|Q9S9M3.2|WAKLC_ARATH RecName: Full=Wall-associated receptor k...    87   2e-18

>emb|CBI15393.3| unnamed protein product [Vitis vinifera]
          Length = 1029

 Score = 89.7 bits (221), Expect(2) = 9e-19
 Identities = 44/104 (42%), Positives = 67/104 (64%)
 Frame = -1

Query: 397 KLCFERYGGPLLLKNIQKHDEAFRSLKIISADEVFKMTDDFSKERRISRGGQGTVFRANQ 218
           K  F+R GG LL + I     AF   KI ++DE+ K TD+F+K R + +GGQGTV++   
Sbjct: 227 KRFFKRNGGLLLQQQISSDKIAFEKTKIFTSDELEKATDNFNKNRILGQGGQGTVYKGML 286

Query: 217 VDGQLVVAKAANKVDEGQVEVFISEAILLSGLSHPNIIRLLSMC 86
            DG++V  K +  VDE Q+E FI+E ++LS ++H N++ +L  C
Sbjct: 287 NDGRIVAVKKSKIVDENQLEHFINEIVILSQINHRNVVGILGCC 330



 Score = 28.5 bits (62), Expect(2) = 9e-19
 Identities = 10/23 (43%), Positives = 18/23 (78%)
 Frame = -2

Query: 90  CVEFKCPVLMNEYAPNGTLYELL 22
           C+E + P+L+ E+  NGTL++L+
Sbjct: 330 CLETEVPLLVYEFISNGTLFQLI 352


>ref|XP_002274809.1| PREDICTED: wall-associated receptor kinase-like 9-like [Vitis
           vinifera]
          Length = 718

 Score = 89.7 bits (221), Expect(2) = 9e-19
 Identities = 44/104 (42%), Positives = 67/104 (64%)
 Frame = -1

Query: 397 KLCFERYGGPLLLKNIQKHDEAFRSLKIISADEVFKMTDDFSKERRISRGGQGTVFRANQ 218
           K  F+R GG LL + I     AF   KI ++DE+ K TD+F+K R + +GGQGTV++   
Sbjct: 347 KRFFKRNGGLLLQQQISSDKIAFEKTKIFTSDELEKATDNFNKNRILGQGGQGTVYKGML 406

Query: 217 VDGQLVVAKAANKVDEGQVEVFISEAILLSGLSHPNIIRLLSMC 86
            DG++V  K +  VDE Q+E FI+E ++LS ++H N++ +L  C
Sbjct: 407 NDGRIVAVKKSKIVDENQLEHFINEIVILSQINHRNVVGILGCC 450



 Score = 28.5 bits (62), Expect(2) = 9e-19
 Identities = 10/23 (43%), Positives = 18/23 (78%)
 Frame = -2

Query: 90  CVEFKCPVLMNEYAPNGTLYELL 22
           C+E + P+L+ E+  NGTL++L+
Sbjct: 450 CLETEVPLLVYEFISNGTLFQLI 472


>ref|XP_002304840.1| predicted protein [Populus trichocarpa] gi|222842272|gb|EEE79819.1|
           predicted protein [Populus trichocarpa]
          Length = 702

 Score = 88.2 bits (217), Expect(2) = 1e-18
 Identities = 43/104 (41%), Positives = 66/104 (63%)
 Frame = -1

Query: 397 KLCFERYGGPLLLKNIQKHDEAFRSLKIISADEVFKMTDDFSKERRISRGGQGTVFRANQ 218
           K  F+R GG LL + +   D + +  KI S++E+ K TD F++ R +  GGQGTV++   
Sbjct: 343 KKFFKRNGGLLLQQQLSSSDGSVQKTKIFSSNELEKATDYFNESRILGHGGQGTVYKGML 402

Query: 217 VDGQLVVAKAANKVDEGQVEVFISEAILLSGLSHPNIIRLLSMC 86
            DG +V  K +  VDE ++E FI+E ++LS +SH N++RLL  C
Sbjct: 403 ADGTIVAVKKSKIVDEDKLEEFINEVVILSQISHRNVVRLLGCC 446



 Score = 29.6 bits (65), Expect(2) = 1e-18
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -2

Query: 90  CVEFKCPVLMNEYAPNGTLYELL 22
           C+E   P+L+ E+ PNGTL++ L
Sbjct: 446 CLETDVPLLVYEFIPNGTLFQYL 468


>ref|NP_173063.1| wall-associated receptor kinase-like 1 [Arabidopsis thaliana]
           gi|75265483|sp|Q9S9M5.1|WAKLA_ARATH RecName:
           Full=Wall-associated receptor kinase-like 1; Flags:
           Precursor gi|6587816|gb|AAF18507.1|AC010924_20 Contains
           similarity to gb|AJ009696 wall-associated kinase 1 from
           Arabidopsis thaliana and contains a protein kinase
           PF|00069 domain [Arabidopsis thaliana]
           gi|332191290|gb|AEE29411.1| wall-associated receptor
           kinase-like 1 [Arabidopsis thaliana]
          Length = 730

 Score = 87.4 bits (215), Expect(2) = 2e-18
 Identities = 45/104 (43%), Positives = 66/104 (63%)
 Frame = -1

Query: 397 KLCFERYGGPLLLKNIQKHDEAFRSLKIISADEVFKMTDDFSKERRISRGGQGTVFRANQ 218
           K  F+R GG LL + +   D      KI S+ E+ K TD+FS +R + +GGQGTV++   
Sbjct: 389 KKFFKRNGGLLLKQQLTTKDGNVEMSKIFSSKELRKATDNFSIDRVLGQGGQGTVYKGML 448

Query: 217 VDGQLVVAKAANKVDEGQVEVFISEAILLSGLSHPNIIRLLSMC 86
           VDG +V  K +  VDE ++E FI+E +LLS ++H NI++LL  C
Sbjct: 449 VDGSIVAVKRSKVVDEDKMEEFINEIVLLSQINHRNIVKLLGCC 492



 Score = 29.6 bits (65), Expect(2) = 2e-18
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -2

Query: 90  CVEFKCPVLMNEYAPNGTLYELL 22
           C+E + P+L+ EY PNG L++ L
Sbjct: 492 CLETEVPILVYEYIPNGDLFKRL 514


>sp|Q9S9M3.2|WAKLC_ARATH RecName: Full=Wall-associated receptor kinase-like 3; Flags:
           Precursor
          Length = 730

 Score = 87.4 bits (215), Expect(2) = 2e-18
 Identities = 44/101 (43%), Positives = 66/101 (65%)
 Frame = -1

Query: 388 FERYGGPLLLKNIQKHDEAFRSLKIISADEVFKMTDDFSKERRISRGGQGTVFRANQVDG 209
           F+R GG LL + +   D +    KI S+ E+ K TD+FS +R + +GGQGTV++   VDG
Sbjct: 391 FKRNGGLLLKQQLTTKDGSVEMSKIFSSRELEKATDNFSIDRVLGQGGQGTVYKRMLVDG 450

Query: 208 QLVVAKAANKVDEGQVEVFISEAILLSGLSHPNIIRLLSMC 86
            +V  K +  VDE ++E FI+E +LLS ++H NI++LL  C
Sbjct: 451 SIVAVKRSKVVDEDKMEEFINEIVLLSQINHRNIVKLLGCC 491



 Score = 29.6 bits (65), Expect(2) = 2e-18
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -2

Query: 90  CVEFKCPVLMNEYAPNGTLYELL 22
           C+E + P+L+ EY PNG L++ L
Sbjct: 491 CLETEVPILVYEYIPNGDLFKRL 513


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