BLASTX nr result
ID: Coptis24_contig00028589
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00028589 (252 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN81140.1| hypothetical protein VITISV_007978 [Vitis vinifera] 67 2e-09 emb|CCH50966.1| T4.5 [Malus x robusta] 62 6e-08 gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa] 60 2e-07 emb|CAN67073.1| hypothetical protein VITISV_011746 [Vitis vinifera] 58 7e-07 ref|XP_002303321.1| predicted protein [Populus trichocarpa] gi|2... 57 2e-06 >emb|CAN81140.1| hypothetical protein VITISV_007978 [Vitis vinifera] Length = 791 Score = 67.0 bits (162), Expect = 2e-09 Identities = 31/74 (41%), Positives = 46/74 (62%) Frame = +1 Query: 1 KDIASGRILFQGPTEHGLYPIHLISSTHTRPHAFLSTAFVSTKAPASTWHSRLGHPDQAV 180 KD+ +G L GP++ GLYPI+L + ++ HAF + V KA +TWH RLGHP + Sbjct: 173 KDLKTGETLMTGPSDRGLYPINLQQLSSSKFHAF--SMIVGVKASPATWHCRLGHPSSST 230 Query: 181 MAHLAHNKSVARSE 222 + H+ HN S+ S+ Sbjct: 231 LHHVLHNYSLPISD 244 >emb|CCH50966.1| T4.5 [Malus x robusta] Length = 1670 Score = 61.6 bits (148), Expect = 6e-08 Identities = 28/66 (42%), Positives = 39/66 (59%) Frame = +1 Query: 1 KDIASGRILFQGPTEHGLYPIHLISSTHTRPHAFLSTAFVSTKAPASTWHSRLGHPDQAV 180 KD+++G++LFQGP+E GLYP + +S A TA + KA TWH RLGHP Sbjct: 684 KDLSTGKMLFQGPSEGGLYPFYWNASNGVSGIAISPTALMIAKADIHTWHRRLGHPSGGT 743 Query: 181 MAHLAH 198 + + H Sbjct: 744 LHSVVH 749 >gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa] Length = 1384 Score = 60.1 bits (144), Expect = 2e-07 Identities = 28/70 (40%), Positives = 43/70 (61%) Frame = +1 Query: 1 KDIASGRILFQGPTEHGLYPIHLISSTHTRPHAFLSTAFVSTKAPASTWHSRLGHPDQAV 180 KD+ +G++L+ G +E+GLYP S T S A+VS++ A TWHSRLGH + Sbjct: 442 KDLKTGKMLYHGKSENGLYPFRFPSKTSK---VSSSLAYVSSRVSAETWHSRLGHASSTI 498 Query: 181 MAHLAHNKSV 210 ++ + NK+V Sbjct: 499 VSKVLSNKAV 508 >emb|CAN67073.1| hypothetical protein VITISV_011746 [Vitis vinifera] Length = 879 Score = 58.2 bits (139), Expect = 7e-07 Identities = 30/70 (42%), Positives = 41/70 (58%) Frame = +1 Query: 1 KDIASGRILFQGPTEHGLYPIHLISSTHTRPHAFLSTAFVSTKAPASTWHSRLGHPDQAV 180 KDI +G L +G +E GLYPI L S + + HA +A V KA S WHSRLGH + Sbjct: 234 KDIQTGTTLLEGKSEGGLYPIQLXSMSINKSHAL--SAVVGIKASVSIWHSRLGHASLPI 291 Query: 181 MAHLAHNKSV 210 ++ L + S+ Sbjct: 292 VSQLLNKHSL 301 >ref|XP_002303321.1| predicted protein [Populus trichocarpa] gi|222840753|gb|EEE78300.1| predicted protein [Populus trichocarpa] Length = 324 Score = 57.0 bits (136), Expect = 2e-06 Identities = 30/74 (40%), Positives = 42/74 (56%) Frame = +1 Query: 1 KDIASGRILFQGPTEHGLYPIHLISSTHTRPHAFLSTAFVSTKAPASTWHSRLGHPDQAV 180 KDI +G L GP+++ LYPI+L + + HA T VS KAP TWH LGH + Sbjct: 238 KDILTGDTLLTGPSDNELYPINLCQLSSSSYHALTMT--VSVKAPTFTWHCCLGHTSSDI 295 Query: 181 MAHLAHNKSVARSE 222 + H+ N S+ S+ Sbjct: 296 LHHVISNFSLPVSD 309