BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028583
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containi...   170   1e-40
emb|CBI40590.3| unnamed protein product [Vitis vinifera]              170   1e-40
ref|XP_002523296.1| pentatricopeptide repeat-containing protein,...   142   3e-32
ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containi...   140   8e-32
ref|XP_004142577.1| PREDICTED: pentatricopeptide repeat-containi...   140   8e-32

>ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08510-like [Vitis vinifera]
          Length = 512

 Score =  170 bits (430), Expect = 1e-40
 Identities = 83/124 (66%), Positives = 96/124 (77%)
 Frame = +1

Query: 76  MNQLKQIHAQTLITGTDQYKFLITKLLEIPNITYAQKMFDTIPQPTTFPYNKLIQAYSSH 255
           MN+LKQI A TL  G +  K LI  LL+IP+I YA K+FD IP+PT F YNKLIQAYSSH
Sbjct: 1   MNRLKQIQAYTLRNGIEHTKQLIVSLLQIPSIPYAHKLFDFIPKPTVFLYNKLIQAYSSH 60

Query: 256 GPYTQCLKLYSQMCLRGCWPNPHSFTFLFAACASLLSRQQGQMVHTQFFKLGFEYDPYAL 435
           GP+ QC  LY+QMCL+GC PN HSFTFLF+ACASL S QQG+M+HT F K GF  D +AL
Sbjct: 61  GPHHQCFSLYTQMCLQGCSPNEHSFTFLFSACASLSSHQQGRMLHTHFVKSGFGCDVFAL 120

Query: 436 TALV 447
           TALV
Sbjct: 121 TALV 124


>emb|CBI40590.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score =  170 bits (430), Expect = 1e-40
 Identities = 83/124 (66%), Positives = 96/124 (77%)
 Frame = +1

Query: 76  MNQLKQIHAQTLITGTDQYKFLITKLLEIPNITYAQKMFDTIPQPTTFPYNKLIQAYSSH 255
           MN+LKQI A TL  G +  K LI  LL+IP+I YA K+FD IP+PT F YNKLIQAYSSH
Sbjct: 1   MNRLKQIQAYTLRNGIEHTKQLIVSLLQIPSIPYAHKLFDFIPKPTVFLYNKLIQAYSSH 60

Query: 256 GPYTQCLKLYSQMCLRGCWPNPHSFTFLFAACASLLSRQQGQMVHTQFFKLGFEYDPYAL 435
           GP+ QC  LY+QMCL+GC PN HSFTFLF+ACASL S QQG+M+HT F K GF  D +AL
Sbjct: 61  GPHHQCFSLYTQMCLQGCSPNEHSFTFLFSACASLSSHQQGRMLHTHFVKSGFGCDVFAL 120

Query: 436 TALV 447
           TALV
Sbjct: 121 TALV 124


>ref|XP_002523296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537384|gb|EEF39012.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 353

 Score =  142 bits (358), Expect = 3e-32
 Identities = 73/124 (58%), Positives = 81/124 (65%)
 Frame = +1

Query: 76  MNQLKQIHAQTLITGTDQYKFLITKLLEIPNITYAQKMFDTIPQPTTFPYNKLIQAYSSH 255
           MNQLKQIHA TL  G D  K L  +L++IPN+ YA K+ D IP P  F YNKLIQAYS  
Sbjct: 1   MNQLKQIHAYTLRNGIDYNKTLTERLIQIPNVPYAHKLIDLIPSPNVFLYNKLIQAYSFQ 60

Query: 256 GPYTQCLKLYSQMCLRGCWPNPHSFTFLFAACASLLSRQQGQMVHTQFFKLGFEYDPYAL 435
               QC  +YSQM  R C  N H+FTFLFAACAS  S    QM+HT F K GFE D  AL
Sbjct: 61  NQLHQCFSIYSQMRSRNCTGNQHTFTFLFAACASFFSPLHAQMLHTHFKKSGFESDVIAL 120

Query: 436 TALV 447
           TALV
Sbjct: 121 TALV 124


>ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08510-like [Cucumis sativus]
          Length = 512

 Score =  140 bits (354), Expect = 8e-32
 Identities = 69/124 (55%), Positives = 88/124 (70%)
 Frame = +1

Query: 76  MNQLKQIHAQTLITGTDQYKFLITKLLEIPNITYAQKMFDTIPQPTTFPYNKLIQAYSSH 255
           MNQLKQIHA +L  G D  KFLI KLL++P++ YA  +FD IP+P+ + YNK IQ +SS 
Sbjct: 1   MNQLKQIHAYSLRNGLDHTKFLIEKLLQLPDLPYACTLFDQIPKPSVYLYNKFIQTFSSI 60

Query: 256 GPYTQCLKLYSQMCLRGCWPNPHSFTFLFAACASLLSRQQGQMVHTQFFKLGFEYDPYAL 435
           G   +C  LY QMC +GC PN +SFTFLF ACASL +   GQM+H+ F K GF  D +A+
Sbjct: 61  GHPHRCWLLYCQMCSQGCSPNQYSFTFLFPACASLFNVYPGQMLHSHFCKSGFASDMFAM 120

Query: 436 TALV 447
           TAL+
Sbjct: 121 TALL 124


>ref|XP_004142577.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08510-like [Cucumis sativus]
          Length = 589

 Score =  140 bits (354), Expect = 8e-32
 Identities = 69/124 (55%), Positives = 88/124 (70%)
 Frame = +1

Query: 76  MNQLKQIHAQTLITGTDQYKFLITKLLEIPNITYAQKMFDTIPQPTTFPYNKLIQAYSSH 255
           MNQLKQIHA +L  G D  KFLI KLL++P++ YA  +FD IP+P+ + YNK IQ +SS 
Sbjct: 1   MNQLKQIHAYSLRNGLDHTKFLIEKLLQLPDLPYACTLFDQIPKPSVYLYNKFIQTFSSI 60

Query: 256 GPYTQCLKLYSQMCLRGCWPNPHSFTFLFAACASLLSRQQGQMVHTQFFKLGFEYDPYAL 435
           G   +C  LY QMC +GC PN +SFTFLF ACASL +   GQM+H+ F K GF  D +A+
Sbjct: 61  GHPHRCWLLYCQMCSQGCSPNQYSFTFLFPACASLFNVYPGQMLHSHFCKSGFASDMFAM 120

Query: 436 TALV 447
           TAL+
Sbjct: 121 TALL 124