BLASTX nr result

ID: Coptis24_contig00028562 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028562
         (685 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309188.1| predicted protein [Populus trichocarpa] gi|2...    77   3e-12
ref|XP_002323679.1| predicted protein [Populus trichocarpa] gi|2...    75   2e-11
ref|XP_002268056.2| PREDICTED: uncharacterized protein LOC100267...    74   3e-11
ref|XP_004161704.1| PREDICTED: uncharacterized LOC101211904 [Cuc...    71   2e-10
ref|XP_004142680.1| PREDICTED: uncharacterized protein LOC101211...    71   2e-10

>ref|XP_002309188.1| predicted protein [Populus trichocarpa] gi|222855164|gb|EEE92711.1|
           predicted protein [Populus trichocarpa]
          Length = 205

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 4/157 (2%)
 Frame = +1

Query: 16  LTKRSTMSPTQKHQSQPTRKPLQPKNFNTTENV-VKKKKPNDQEQWFEISLDGNVNKENN 192
           L  +S ++  +  + +  RKPLQPKN   T    V+  KP  +++W E S+  + NKEN+
Sbjct: 2   LKLQSPLTGDENLRQKSCRKPLQPKNSPVTPMTQVQILKP--KQEWIEFSVVKDSNKENH 59

Query: 193 PV---SPEVKKIEPFDSSLAEELNVIRKRIERLRVXXXXXXXXXXXXXXXXXXXXXXIQK 363
           P+   +P    IEP DSSLAEEL+ I+K++ERLR+                      +++
Sbjct: 60  PIYTTTPTKSIIEPLDSSLAEELSAIKKKLERLRLDRERTEKMLKEREMVMDLQMKELEQ 119

Query: 364 RGNVQNEVXXXXXXXXXXXXXXSYCRRTAPIKSLRER 474
           RG VQ  +              SY    +PI++LRE+
Sbjct: 120 RGEVQKRLEIQVDILYRLKELQSYSMIISPIRTLREK 156


>ref|XP_002323679.1| predicted protein [Populus trichocarpa] gi|222868309|gb|EEF05440.1|
           predicted protein [Populus trichocarpa]
          Length = 205

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 46/138 (33%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
 Frame = +1

Query: 70  RKPLQPKNFNTTENVVKKKKPNDQEQWFEISLDGNVNKENNPV---SPEVKKIEPFDSSL 240
           RKPLQPKN   T  + + +    +++W E S+  + NKEN+P+   +P    +EP DSSL
Sbjct: 20  RKPLQPKNSPATP-MTQIQILKSKQEWTEFSVVKDSNKENHPIYTTTPTKPIVEPLDSSL 78

Query: 241 AEELNVIRKRIERLRVXXXXXXXXXXXXXXXXXXXXXXIQKRGNVQNEVXXXXXXXXXXX 420
           AEEL+ I+K++ERLR                       +++RG VQ  +           
Sbjct: 79  AEELSAIKKKLERLRSDKERTEKMLEERAMVLDLQKKELEQRGEVQKRLEIEVDRLYRLK 138

Query: 421 XXXSYCRRTAPIKSLRER 474
              SY  R +PI++LRE+
Sbjct: 139 ELHSYSMRISPIRTLREK 156


>ref|XP_002268056.2| PREDICTED: uncharacterized protein LOC100267058 [Vitis vinifera]
           gi|297735531|emb|CBI18025.3| unnamed protein product
           [Vitis vinifera]
          Length = 239

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 51/153 (33%), Positives = 78/153 (50%), Gaps = 1/153 (0%)
 Frame = +1

Query: 19  TKRSTMSPTQKHQSQPTRKPLQPKNFNTT-ENVVKKKKPNDQEQWFEISLDGNVNKENNP 195
           T R  ++ TQK +++  RKPL+P+N +   ++V  K KP    +W EIS   + NKEN+P
Sbjct: 3   TARFPVAGTQKLRTKIGRKPLRPRNISADLDSVQIKAKP----EWIEISRVADSNKENHP 58

Query: 196 VSPEVKKIEPFDSSLAEELNVIRKRIERLRVXXXXXXXXXXXXXXXXXXXXXXIQKRGNV 375
           V     ++E FD+SLAEEL+ +RKR ERL++                      +++RG  
Sbjct: 59  VYVTPVRMESFDASLAEELSAVRKRRERLKIEGDKVEKMLRERDLVMGMWMKEVKQRGEE 118

Query: 376 QNEVXXXXXXXXXXXXXXSYCRRTAPIKSLRER 474
           Q ++              S   R +PI+ LRER
Sbjct: 119 QKKLEMEVDRLYRLKELRS-AVRISPIRPLRER 150


>ref|XP_004161704.1| PREDICTED: uncharacterized LOC101211904 [Cucumis sativus]
          Length = 191

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 48/139 (34%), Positives = 68/139 (48%), Gaps = 4/139 (2%)
 Frame = +1

Query: 70  RKPLQPKNF--NTTENVVK--KKKPNDQEQWFEISLDGNVNKENNPVSPEVKKIEPFDSS 237
           R+PLQPKN   N   +V K  K KP    +  +ISL G+ NKEN+P  P    IE  D S
Sbjct: 20  RRPLQPKNSLPNPVPSVAKIIKSKP----EIIQISLSGDANKENHP-PPTTVSIESCDLS 74

Query: 238 LAEELNVIRKRIERLRVXXXXXXXXXXXXXXXXXXXXXXIQKRGNVQNEVXXXXXXXXXX 417
           LA+ELN +++++ERLR+                      + +R   Q ++          
Sbjct: 75  LADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKELLQRSQEQRDLEMEVDRLFRL 134

Query: 418 XXXXSYCRRTAPIKSLRER 474
               SYC R +PI+SLRE+
Sbjct: 135 KELRSYCMRISPIRSLREK 153


>ref|XP_004142680.1| PREDICTED: uncharacterized protein LOC101211904 [Cucumis sativus]
          Length = 191

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 48/139 (34%), Positives = 68/139 (48%), Gaps = 4/139 (2%)
 Frame = +1

Query: 70  RKPLQPKNF--NTTENVVK--KKKPNDQEQWFEISLDGNVNKENNPVSPEVKKIEPFDSS 237
           R+PLQPKN   N   +V K  K KP    +  +ISL G+ NKEN+P  P    IE  D S
Sbjct: 20  RRPLQPKNSLPNPVPSVAKIIKSKP----EIIQISLSGDANKENHP-PPTTVSIESCDLS 74

Query: 238 LAEELNVIRKRIERLRVXXXXXXXXXXXXXXXXXXXXXXIQKRGNVQNEVXXXXXXXXXX 417
           LA+ELN +++++ERLR+                      + +R   Q ++          
Sbjct: 75  LADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKELLQRSQEQRDLEMEVDRLFRL 134

Query: 418 XXXXSYCRRTAPIKSLRER 474
               SYC R +PI+SLRE+
Sbjct: 135 KELRSYCMRISPIRSLREK 153


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