BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028519
         (222 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30945.3| unnamed protein product [Vitis vinifera]               88   8e-16
ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containi...    88   8e-16
emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]    88   8e-16
gb|AAG50561.1|AC073506_3 hypothetical protein [Arabidopsis thali...    77   1e-12
ref|NP_174320.2| PPR repeat domain-containing protein [Arabidops...    77   1e-12

>emb|CBI30945.3| unnamed protein product [Vitis vinifera]
          Length = 796

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 41/60 (68%), Positives = 52/60 (86%)
 Frame = -2

Query: 221 LNKENPLLSYNIACRMFDRNLIPDLDLCKKVSLRLILTGKRKEAEKLLKRFVERGLLSPQ 42
           L+K  PL+SYN+ACRMF+RNLIPDL LC+KVS +L+L GK +EA+KL+ RFVERG +SPQ
Sbjct: 732 LSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLILRFVERGRISPQ 791


>ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 733

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 41/60 (68%), Positives = 52/60 (86%)
 Frame = -2

Query: 221 LNKENPLLSYNIACRMFDRNLIPDLDLCKKVSLRLILTGKRKEAEKLLKRFVERGLLSPQ 42
           L+K  PL+SYN+ACRMF+RNLIPDL LC+KVS +L+L GK +EA+KL+ RFVERG +SPQ
Sbjct: 669 LSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLILRFVERGRISPQ 728


>emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
          Length = 733

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 41/60 (68%), Positives = 52/60 (86%)
 Frame = -2

Query: 221 LNKENPLLSYNIACRMFDRNLIPDLDLCKKVSLRLILTGKRKEAEKLLKRFVERGLLSPQ 42
           L+K  PL+SYN+ACRMF+RNLIPDL LC+KVS +L+L GK +EA+KL+ RFVERG +SPQ
Sbjct: 669 LSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLILRFVERGRISPQ 728


>gb|AAG50561.1|AC073506_3 hypothetical protein [Arabidopsis thaliana]
          Length = 802

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 36/60 (60%), Positives = 47/60 (78%)
 Frame = -2

Query: 221 LNKENPLLSYNIACRMFDRNLIPDLDLCKKVSLRLILTGKRKEAEKLLKRFVERGLLSPQ 42
           L K  PL +Y +ACRMF+RNLIPD+ +C+K+S RL+L GK  EA+KL+ R VERG +SPQ
Sbjct: 739 LKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHISPQ 798


>ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
           gi|332193082|gb|AEE31203.1| PPR repeat domain-containing
           protein [Arabidopsis thaliana]
          Length = 806

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 36/60 (60%), Positives = 47/60 (78%)
 Frame = -2

Query: 221 LNKENPLLSYNIACRMFDRNLIPDLDLCKKVSLRLILTGKRKEAEKLLKRFVERGLLSPQ 42
           L K  PL +Y +ACRMF+RNLIPD+ +C+K+S RL+L GK  EA+KL+ R VERG +SPQ
Sbjct: 743 LKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHISPQ 802