BLASTX nr result

ID: Coptis24_contig00028504 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028504
         (585 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527278.1| PREDICTED: uncharacterized protein LOC100306...    70   2e-10
gb|ACU14560.1| unknown [Glycine max]                                   70   2e-10
emb|CBI20368.3| unnamed protein product [Vitis vinifera]               69   7e-10
ref|XP_002281822.1| PREDICTED: uncharacterized protein LOC100255...    69   7e-10
ref|XP_004150100.1| PREDICTED: uncharacterized protein LOC101214...    67   2e-09

>ref|XP_003527278.1| PREDICTED: uncharacterized protein LOC100306405 [Glycine max]
          Length = 77

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 39/59 (66%), Positives = 48/59 (81%), Gaps = 1/59 (1%)
 Frame = -3

Query: 436 EVKRTAVCAEMDKLKQHPKGS-YSTNRLLVLNKILQLMSVQRTRAQEEELELLFAGLSL 263
           E K+ AV  EM+++ Q P  S Y+T+R+ VLNKILQLMSVQRT +QE+ELELLFAGLSL
Sbjct: 19  EKKQAAVHEEMNRMNQLPANSAYATHRMKVLNKILQLMSVQRTVSQEQELELLFAGLSL 77


>gb|ACU14560.1| unknown [Glycine max]
          Length = 77

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 39/59 (66%), Positives = 48/59 (81%), Gaps = 1/59 (1%)
 Frame = -3

Query: 436 EVKRTAVCAEMDKLKQHPKGS-YSTNRLLVLNKILQLMSVQRTRAQEEELELLFAGLSL 263
           E K+ AV  EM+++ Q P  S Y+T+R+ VLNKILQLMSVQRT +QE+ELELLFAGLSL
Sbjct: 19  EKKQAAVHEEMNRMNQLPANSAYATHRMKVLNKILQLMSVQRTVSQEQELELLFAGLSL 77


>emb|CBI20368.3| unnamed protein product [Vitis vinifera]
          Length = 141

 Score = 68.6 bits (166), Expect = 7e-10
 Identities = 38/60 (63%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
 Frame = -3

Query: 439 SEVKRTAVCAEMDKLKQHPKGS-YSTNRLLVLNKILQLMSVQRTRAQEEELELLFAGLSL 263
           SE K+ AV  EM ++ Q P  S Y+T+RL VLNKILQL+S+QRT +Q+ ELELLFAGLSL
Sbjct: 82  SEGKKVAVHEEMKRMNQLPTNSTYATHRLRVLNKILQLISIQRTTSQDAELELLFAGLSL 141


>ref|XP_002281822.1| PREDICTED: uncharacterized protein LOC100255450 [Vitis vinifera]
          Length = 77

 Score = 68.6 bits (166), Expect = 7e-10
 Identities = 38/60 (63%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
 Frame = -3

Query: 439 SEVKRTAVCAEMDKLKQHPKGS-YSTNRLLVLNKILQLMSVQRTRAQEEELELLFAGLSL 263
           SE K+ AV  EM ++ Q P  S Y+T+RL VLNKILQL+S+QRT +Q+ ELELLFAGLSL
Sbjct: 18  SEGKKVAVHEEMKRMNQLPTNSTYATHRLRVLNKILQLISIQRTTSQDAELELLFAGLSL 77


>ref|XP_004150100.1| PREDICTED: uncharacterized protein LOC101214758 isoform 1 [Cucumis
           sativus] gi|449464768|ref|XP_004150101.1| PREDICTED:
           uncharacterized protein LOC101214758 isoform 2 [Cucumis
           sativus] gi|449522588|ref|XP_004168308.1| PREDICTED:
           uncharacterized LOC101214758 isoform 1 [Cucumis sativus]
           gi|449522590|ref|XP_004168309.1| PREDICTED:
           uncharacterized LOC101214758 isoform 2 [Cucumis sativus]
          Length = 77

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 39/78 (50%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
 Frame = -3

Query: 493 NKENMNGSNSWAPSSTGSSEVKRTAVCAEMDKLKQHPKGS-YSTNRLLVLNKILQLMSVQ 317
           +K N+     W       + V   AV  EM +++Q P  S Y+T+RL +LNKILQL+S+Q
Sbjct: 3   DKVNVPTKRDWKQMGHEGATV---AVHEEMKRVQQFPSNSTYATHRLRILNKILQLLSIQ 59

Query: 316 RTRAQEEELELLFAGLSL 263
           RT +QEEELELLF+GLSL
Sbjct: 60  RTLSQEEELELLFSGLSL 77


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