BLASTX nr result

ID: Coptis24_contig00028489 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028489
         (799 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003627690.1| hypothetical protein MTR_8g036520 [Medicago ...   183   3e-44
ref|XP_004158199.1| PREDICTED: uncharacterized LOC101204591 [Cuc...   182   7e-44
ref|XP_004135922.1| PREDICTED: uncharacterized protein LOC101204...   179   5e-43
ref|XP_003633576.1| PREDICTED: uncharacterized protein LOC100852...   176   5e-42
ref|XP_002513169.1| conserved hypothetical protein [Ricinus comm...   173   4e-41

>ref|XP_003627690.1| hypothetical protein MTR_8g036520 [Medicago truncatula]
           gi|357514875|ref|XP_003627726.1| hypothetical protein
           MTR_8g037020 [Medicago truncatula]
           gi|355521712|gb|AET02166.1| hypothetical protein
           MTR_8g036520 [Medicago truncatula]
           gi|355521748|gb|AET02202.1| hypothetical protein
           MTR_8g037020 [Medicago truncatula]
           gi|388508088|gb|AFK42110.1| unknown [Medicago
           truncatula]
          Length = 258

 Score =  183 bits (465), Expect = 3e-44
 Identities = 116/269 (43%), Positives = 156/269 (57%), Gaps = 21/269 (7%)
 Frame = -2

Query: 777 ALLVSRRLTSNNKKLVKPISXXXXXLSPFLPNTPTSYSTFSTHQKPSINPFTTLSKF--I 604
           A ++SRRL   +  ++KP        S F   + ++   F   +  S NP ++ S F   
Sbjct: 2   AAIISRRLRLTSS-ILKP--------SHFQSPSSSTNPQFPIFEPLSHNPSSSFSTFPHF 52

Query: 603 FQPQQKPNLKSYYSTLLTNPTSSISQFSQLRKFS----------SSNEKGKEAQQ----- 469
           F    KP L S+  +  +NP    +QF++ R FS          S +EK KE        
Sbjct: 53  FSQSTKPTLSSHKVSNFSNP---FAQFTKPRFFSTNDPSSPSSSSDSEKEKEKDSSPYPS 109

Query: 468 ----FKHQEIEGPTVERDESALANEMRQVLEGLMKTSYDLSKVIAILGLVQLSCGAWVAY 301
               FKHQEIEGPTVERD S LANE R+VLE +MK  Y LS+V+A++GLVQL  G W+ Y
Sbjct: 110 ENPNFKHQEIEGPTVERDLSPLANETREVLERMMKNIYGLSRVVALMGLVQLGVGGWITY 169

Query: 300 TTQSSPLSAVSIQXXXXXXXXXXXXFMLRRMLKHIGFFRKMEEIGRLQILTLSLQVVKSL 121
            T+SSP++ VS+Q            FMLR+ LK + FF+KMEE GRLQILTL+LQV K L
Sbjct: 170 VTRSSPITEVSVQSFLAFAFPFCLAFMLRQSLKPMHFFKKMEEQGRLQILTLTLQVAKQL 229

Query: 120 NTFFVRVRGVSYACVVGMLVALLFSTFSK 34
           N  FVRVRGVS+ C++G+   L+F+  S+
Sbjct: 230 NVLFVRVRGVSFLCMIGLSAGLVFAVVSR 258


>ref|XP_004158199.1| PREDICTED: uncharacterized LOC101204591 [Cucumis sativus]
          Length = 270

 Score =  182 bits (462), Expect = 7e-44
 Identities = 120/274 (43%), Positives = 161/274 (58%), Gaps = 26/274 (9%)
 Frame = -2

Query: 777 ALLVSRRLTSNNKKLVKPISXXXXXLSPFLPNTPTSYSTFSTHQKPSI-------NPFTT 619
           A +V+RRL+SN   + +P       +S  +P+ P +    S H  PS        +P TT
Sbjct: 2   AAIVTRRLSSN---IFRPFLPSTFLISQ-IPHEPLT-RFHSPHSDPSFLGSSRRTSPNTT 56

Query: 618 LSKF----------IFQPQQKPNLK------SYYSTLLTNPTS-SISQFSQLRKFSSSNE 490
           +  F          +    + PN        SY    L NP+  SIS F +  +FS+++E
Sbjct: 57  VDLFNSISKSITHDLLVQNKTPNFNDPIGSGSYSIMKLRNPSFVSISDFDRKSRFSTTSE 116

Query: 489 KGKEAQ--QFKHQEIEGPTVERDESALANEMRQVLEGLMKTSYDLSKVIAILGLVQLSCG 316
           K  E +   FKHQ+IEGPTVERD SALANE R V+E +MK  Y LSK +A+LGLVQL  G
Sbjct: 117 KENEQKPDDFKHQDIEGPTVERDLSALANETRDVIEAMMKNVYRLSKAMAVLGLVQLGIG 176

Query: 315 AWVAYTTQSSPLSAVSIQXXXXXXXXXXXXFMLRRMLKHIGFFRKMEEIGRLQILTLSLQ 136
           AW++Y T+ SP++ VSIQ            F+LR+ LK + FF+KMEE GRLQILTLSLQ
Sbjct: 177 AWISYITRGSPITEVSIQSFVAFGFPFSMAFILRQSLKPMMFFKKMEEQGRLQILTLSLQ 236

Query: 135 VVKSLNTFFVRVRGVSYACVVGMLVALLFSTFSK 34
           + K+LN  FVRVR VS+ CV G+ V +LF+  S+
Sbjct: 237 IGKNLNALFVRVRTVSFLCVTGLSVGILFALLSR 270


>ref|XP_004135922.1| PREDICTED: uncharacterized protein LOC101204591 [Cucumis sativus]
          Length = 270

 Score =  179 bits (455), Expect = 5e-43
 Identities = 120/270 (44%), Positives = 158/270 (58%), Gaps = 22/270 (8%)
 Frame = -2

Query: 777 ALLVSRRLTSNNKKLVKPISXXXXXLSPFLPNT----PTSYSTF-----STHQKPSINPF 625
           A +V+RRL+SN  +   P S       P  P T    P S  +F      T    +++ F
Sbjct: 2   AAIVTRRLSSNIFRPFLP-STFLISQIPHEPLTRFHSPHSDPSFLGSSRRTSPNTTVDLF 60

Query: 624 TTLSKFIFQPQQKPNLK----------SYYSTLLTNPTS-SISQFSQLRKFSSSNEKGKE 478
            ++SK I       N            SY    L NP+  SIS F +  +FS+++EK  E
Sbjct: 61  NSISKSITHDLLVQNKTLNFNDPIGSGSYSIMKLRNPSFVSISDFDRKSRFSTTSEKENE 120

Query: 477 AQ--QFKHQEIEGPTVERDESALANEMRQVLEGLMKTSYDLSKVIAILGLVQLSCGAWVA 304
            +   FKHQ+IEGPTVERD SALANE R V+E +MK  Y LSK +A+LGLVQL  GAW++
Sbjct: 121 QKPDDFKHQDIEGPTVERDLSALANETRDVIEAMMKNVYRLSKAMAVLGLVQLGIGAWIS 180

Query: 303 YTTQSSPLSAVSIQXXXXXXXXXXXXFMLRRMLKHIGFFRKMEEIGRLQILTLSLQVVKS 124
           Y T+ SP++ VSIQ            F+LR+ LK + FF+KMEE GRLQILTLSLQ+ K+
Sbjct: 181 YITRGSPITEVSIQSFVAFGFPFSMAFILRQSLKPMMFFKKMEEQGRLQILTLSLQIGKN 240

Query: 123 LNTFFVRVRGVSYACVVGMLVALLFSTFSK 34
           LN  FVRVR VS+ CV G+ V +LF+  S+
Sbjct: 241 LNALFVRVRTVSFLCVTGLSVGILFALLSR 270


>ref|XP_003633576.1| PREDICTED: uncharacterized protein LOC100852421 [Vitis vinifera]
          Length = 319

 Score =  176 bits (446), Expect = 5e-42
 Identities = 109/230 (47%), Positives = 144/230 (62%), Gaps = 22/230 (9%)
 Frame = -2

Query: 669 YSTFSTH-QKPSI-------NPFTTLSKFIFQPQQKPNLKSY----------YSTLLTNP 544
           YSTFST  +KPS        NP    S   FQ  Q P   ++           ST + NP
Sbjct: 86  YSTFSTQFKKPSPFAQLSHQNPLIPKSISGFQDLQNPKPSNFDLLFTRSYTSSSTKVGNP 145

Query: 543 TSSISQFSQLRKFSSSNEKGK----EAQQFKHQEIEGPTVERDESALANEMRQVLEGLMK 376
             + +  ++ + FS+S+        + ++FKHQEIEGPTVERD SALANE R+VL   MK
Sbjct: 146 YPNWASDAKPKYFSTSDPSPDSDKPQNREFKHQEIEGPTVERDTSALANETREVLGLQMK 205

Query: 375 TSYDLSKVIAILGLVQLSCGAWVAYTTQSSPLSAVSIQXXXXXXXXXXXXFMLRRMLKHI 196
           T + LS V+A+LGLVQL+ GAW++Y T++SP+  V+IQ            FMLRR LK +
Sbjct: 206 TIHSLSTVLALLGLVQLALGAWISYITRASPMPEVTIQSIVAFGSPFSMAFMLRRSLKVM 265

Query: 195 GFFRKMEEIGRLQILTLSLQVVKSLNTFFVRVRGVSYACVVGMLVALLFS 46
            FFRKME++GRLQILTL+LQ+ K++N FFVRVRGVS  CV G+ V LL++
Sbjct: 266 DFFRKMEDLGRLQILTLTLQIAKNVNLFFVRVRGVSILCVAGLSVGLLYA 315


>ref|XP_002513169.1| conserved hypothetical protein [Ricinus communis]
           gi|223547667|gb|EEF49160.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 293

 Score =  173 bits (438), Expect = 4e-41
 Identities = 115/269 (42%), Positives = 147/269 (54%), Gaps = 47/269 (17%)
 Frame = -2

Query: 699 SPFLPNTPTSYSTFSTHQKPSINPFTTLSKFI---------FQPQQKPNLKSYYST---- 559
           S F  +   +    S  Q   +NP   +S FI         FQ Q   +LKS   T    
Sbjct: 25  SAFACSASVAAVALSLLQPKPLNPIFYVSNFISTSLNHISSFQSQATIDLKSTNLTRNFI 84

Query: 558 ------LLTNPTSSISQFSQL--------------------RKFSSSN-EKGKEAQQ--- 469
                      T +IS FS L                    R FSSS+ EK +   +   
Sbjct: 85  RSRSNSATNQSTDNISSFSNLNLKKSHITYLKQIQLMNKKPRYFSSSDSEKSQNPSEYPS 144

Query: 468 ----FKHQEIEGPTVERDESALANEMRQVLEGLMKTSYDLSKVIAILGLVQLSCGAWVAY 301
               FKHQEIEGPTVERD SALANE R+VLE +MK+ Y LSKV+A+LGL+QL  GAW++Y
Sbjct: 145 KMPNFKHQEIEGPTVERDLSALANETREVLERMMKSIYGLSKVMALLGLIQLGVGAWISY 204

Query: 300 TTQSSPLSAVSIQXXXXXXXXXXXXFMLRRMLKHIGFFRKMEEIGRLQILTLSLQVVKSL 121
            T+S+P++ VSIQ            FMLR+ LK + FF+KMEE+GRLQILTL+LQV K++
Sbjct: 205 VTKSTPITEVSIQSFVAFGFPFTLAFMLRQSLKPMYFFKKMEELGRLQILTLTLQVAKNM 264

Query: 120 NTFFVRVRGVSYACVVGMLVALLFSTFSK 34
           NTFFVR R VS  C+ GM + LL +   +
Sbjct: 265 NTFFVRARSVSVLCIAGMSLGLLLTLLQR 293


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