BLASTX nr result

ID: Coptis24_contig00028473 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028473
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268648.1| PREDICTED: putative disease resistance prote...    65   4e-09
emb|CAN60967.1| hypothetical protein VITISV_017509 [Vitis vinifera]    65   4e-09
ref|XP_002269049.2| PREDICTED: putative disease resistance RPP13...    65   6e-09
emb|CAN67336.1| hypothetical protein VITISV_004414 [Vitis vinifera]    65   6e-09
ref|XP_002317122.1| nbs-lrr resistance protein [Populus trichoca...    64   1e-08

>ref|XP_002268648.1| PREDICTED: putative disease resistance protein At3g14460-like
           [Vitis vinifera]
          Length = 1506

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 43/94 (45%), Positives = 49/94 (52%)
 Frame = -3

Query: 286 NIFSSFPYLRVLSLSGCGIELLPASIRHLTGLRYLDLSYTFIKRLPEXXXXXXXXXXXXX 107
           NI   F  LRVLSL    I  +P SI +L  LRYLDLS T+IKRLPE             
Sbjct: 574 NILPKFKSLRVLSLRAYCIRDVPDSIHNLKQLRYLDLSTTWIKRLPESICCLCNLQTMML 633

Query: 106 XXXXXLTALPIMMGFMTQLRHLNIKGCNSLTWMP 5
                L  LP  MG +  LR+L+I G NSL  MP
Sbjct: 634 SNCDSLLELPSKMGKLINLRYLDISGSNSLEEMP 667


>emb|CAN60967.1| hypothetical protein VITISV_017509 [Vitis vinifera]
          Length = 1319

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 43/94 (45%), Positives = 49/94 (52%)
 Frame = -3

Query: 286 NIFSSFPYLRVLSLSGCGIELLPASIRHLTGLRYLDLSYTFIKRLPEXXXXXXXXXXXXX 107
           NI   F  LRVLSL    I  +P SI +L  LRYLDLS T+IKRLPE             
Sbjct: 551 NILPKFKSLRVLSLRAYCIRDVPDSIHNLKQLRYLDLSTTWIKRLPESICCLCNLQTMML 610

Query: 106 XXXXXLTALPIMMGFMTQLRHLNIKGCNSLTWMP 5
                L  LP  MG +  LR+L+I G NSL  MP
Sbjct: 611 SNCDSLLELPSKMGKLINLRYLDISGSNSLEEMP 644


>ref|XP_002269049.2| PREDICTED: putative disease resistance RPP13-like protein 1-like
           [Vitis vinifera]
          Length = 1427

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 39/94 (41%), Positives = 50/94 (53%)
 Frame = -3

Query: 286 NIFSSFPYLRVLSLSGCGIELLPASIRHLTGLRYLDLSYTFIKRLPEXXXXXXXXXXXXX 107
           N+     YLRVLSL GCG+  +P+SI  L  LRYL+ SY+ I+ LP              
Sbjct: 558 NLIMPMRYLRVLSLVGCGMGEVPSSIGELIHLRYLNFSYSRIRSLPNSVGHLYNLQTLIL 617

Query: 106 XXXXXLTALPIMMGFMTQLRHLNIKGCNSLTWMP 5
                LT LPI +G +  LRHL+I G + L  MP
Sbjct: 618 RRCYALTELPIGIGNLKNLRHLDITGTSRLEEMP 651


>emb|CAN67336.1| hypothetical protein VITISV_004414 [Vitis vinifera]
          Length = 1363

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 39/94 (41%), Positives = 50/94 (53%)
 Frame = -3

Query: 286 NIFSSFPYLRVLSLSGCGIELLPASIRHLTGLRYLDLSYTFIKRLPEXXXXXXXXXXXXX 107
           N+     YLRVLSL GCG+  +P+SI  L  LRYL+ SY+ I+ LP              
Sbjct: 553 NLIMPMRYLRVLSLVGCGMGEVPSSIGELIHLRYLNFSYSRIRSLPNSVGHLYNLQTLIL 612

Query: 106 XXXXXLTALPIMMGFMTQLRHLNIKGCNSLTWMP 5
                LT LPI +G +  LRHL+I G + L  MP
Sbjct: 613 RRCYALTELPIGIGNLKNLRHLDITGTSRLEEMP 646


>ref|XP_002317122.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222860187|gb|EEE97734.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 1234

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 42/94 (44%), Positives = 51/94 (54%)
 Frame = -3

Query: 286 NIFSSFPYLRVLSLSGCGIELLPASIRHLTGLRYLDLSYTFIKRLPEXXXXXXXXXXXXX 107
           N+ SSF YLR+L+LSG GI++L  SI  LT LRYLDLS T I++LP              
Sbjct: 613 NLISSFKYLRILNLSGFGIKILHKSIGDLTCLRYLDLSDTPIEKLP-ASICNLQLQTLDL 671

Query: 106 XXXXXLTALPIMMGFMTQLRHLNIKGCNSLTWMP 5
                L  LP     MT LRHL I+ C  L  +P
Sbjct: 672 SSCYILQKLPKRTRMMTSLRHLKIENCARLARLP 705


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