BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028399
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304600.1| predicted protein [Populus trichocarpa] gi|2...   165   4e-39
ref|XP_002528143.1| pentatricopeptide repeat-containing protein,...   164   5e-39
ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containi...   164   9e-39
emb|CBI27232.3| unnamed protein product [Vitis vinifera]              164   9e-39
ref|XP_002297917.1| predicted protein [Populus trichocarpa] gi|2...   161   6e-38

>ref|XP_002304600.1| predicted protein [Populus trichocarpa] gi|222842032|gb|EEE79579.1|
           predicted protein [Populus trichocarpa]
          Length = 641

 Score =  165 bits (417), Expect = 4e-39
 Identities = 80/117 (68%), Positives = 96/117 (82%)
 Frame = -1

Query: 467 YNILLEGLCKLNNISQAMDLLNSMLDRGCDPDLITCNIFLMILRENQNPPQDGRDFLDGL 288
           YNILL  LCK ++IS+A+DLLNSMLDRGCDPDL+TC IFL  LRE  +PPQDGR+FLDGL
Sbjct: 524 YNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTLREKLDPPQDGREFLDGL 583

Query: 287 VLQLVKRRRIFAASKIVEVMLQKYFSPKASTWGRVVKDLCRHRKVQAGIELCRSKLF 117
           V++L+KR+R+  ASKIVEVMLQK   PK STW RVV+DLC  +KVQA I+ C S L+
Sbjct: 584 VVRLLKRQRVLGASKIVEVMLQKLLPPKPSTWTRVVEDLCNPKKVQAAIQKCWSILY 640


>ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532441|gb|EEF34234.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 653

 Score =  164 bits (416), Expect = 5e-39
 Identities = 79/117 (67%), Positives = 97/117 (82%)
 Frame = -1

Query: 467 YNILLEGLCKLNNISQAMDLLNSMLDRGCDPDLITCNIFLMILRENQNPPQDGRDFLDGL 288
           YNIL   LCK ++IS+A+DLLNSMLDRGCDPDL+TCNIFL +LRE  +PPQDG  FLD L
Sbjct: 536 YNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLRMLREKLDPPQDGAKFLDEL 595

Query: 287 VLQLVKRRRIFAASKIVEVMLQKYFSPKASTWGRVVKDLCRHRKVQAGIELCRSKLF 117
           V++L+KR+R   ASKIVEVMLQK+ SPKASTW RVV +LC+ +K+QA I+ C SKL+
Sbjct: 596 VVRLLKRQRNLGASKIVEVMLQKFLSPKASTWARVVHELCQPKKIQAVIDKCWSKLY 652


>ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  164 bits (414), Expect = 9e-39
 Identities = 79/117 (67%), Positives = 95/117 (81%)
 Frame = -1

Query: 467 YNILLEGLCKLNNISQAMDLLNSMLDRGCDPDLITCNIFLMILRENQNPPQDGRDFLDGL 288
           YNILL  LCK N+IS A+DLLNSMLDRGC+PDLITCNIFL  LRE  NPPQDGR+FLD L
Sbjct: 527 YNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDEL 586

Query: 287 VLQLVKRRRIFAASKIVEVMLQKYFSPKASTWGRVVKDLCRHRKVQAGIELCRSKLF 117
           V++L KR+RI  A+KI+EVMLQK+  P ASTW R++ +LC+ +KVQA I+ C S LF
Sbjct: 587 VVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQAIIDKCWSSLF 643


>emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  164 bits (414), Expect = 9e-39
 Identities = 79/117 (67%), Positives = 95/117 (81%)
 Frame = -1

Query: 467 YNILLEGLCKLNNISQAMDLLNSMLDRGCDPDLITCNIFLMILRENQNPPQDGRDFLDGL 288
           YNILL  LCK N+IS A+DLLNSMLDRGC+PDLITCNIFL  LRE  NPPQDGR+FLD L
Sbjct: 543 YNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDEL 602

Query: 287 VLQLVKRRRIFAASKIVEVMLQKYFSPKASTWGRVVKDLCRHRKVQAGIELCRSKLF 117
           V++L KR+RI  A+KI+EVMLQK+  P ASTW R++ +LC+ +KVQA I+ C S LF
Sbjct: 603 VVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQAIIDKCWSSLF 659


>ref|XP_002297917.1| predicted protein [Populus trichocarpa] gi|222845175|gb|EEE82722.1|
           predicted protein [Populus trichocarpa]
          Length = 670

 Score =  161 bits (407), Expect = 6e-38
 Identities = 78/117 (66%), Positives = 97/117 (82%)
 Frame = -1

Query: 467 YNILLEGLCKLNNISQAMDLLNSMLDRGCDPDLITCNIFLMILRENQNPPQDGRDFLDGL 288
           YNILL  LCK ++IS+A+DLLNSMLDRGCDPDL+TC IFL +LRE  +PPQDGR+FLD L
Sbjct: 554 YNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRMLREKLDPPQDGREFLDEL 613

Query: 287 VLQLVKRRRIFAASKIVEVMLQKYFSPKASTWGRVVKDLCRHRKVQAGIELCRSKLF 117
           V++L+KR+R+  ASKIVEVMLQK   PK STW RVV++LC+ +KVQA I+ C S L+
Sbjct: 614 VVRLLKRQRVLGASKIVEVMLQKLLPPKHSTWARVVENLCKPKKVQAVIQKCWSILY 670