BLASTX nr result

ID: Coptis24_contig00028365 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028365
         (705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300539.1| predicted protein [Populus trichocarpa] gi|2...   294   1e-77
ref|XP_002317030.1| predicted protein [Populus trichocarpa] gi|2...   292   5e-77
ref|XP_002263237.2| PREDICTED: subtilisin-like protease-like [Vi...   288   1e-75
emb|CBI37484.3| unnamed protein product [Vitis vinifera]              287   1e-75
ref|XP_002528535.1| Cucumisin precursor, putative [Ricinus commu...   285   6e-75

>ref|XP_002300539.1| predicted protein [Populus trichocarpa] gi|222847797|gb|EEE85344.1|
            predicted protein [Populus trichocarpa]
          Length = 746

 Score =  294 bits (752), Expect = 1e-77
 Identities = 145/202 (71%), Positives = 164/202 (81%)
 Frame = +3

Query: 3    PTWSPAAIKSAIMTTATTLSKSGRPITVDPEGRRGNPFDYGSGFVDPLKVLNPGLVYDAQ 182
            P+WSP+AIKSAIMTTAT L KSG+PI VDPEGR  N FDYGSGFVDP +VL+PGLVYDA 
Sbjct: 545  PSWSPSAIKSAIMTTATILDKSGKPIRVDPEGRMANAFDYGSGFVDPTRVLDPGLVYDAH 604

Query: 183  PRDYKAFLCSIGYDEELLHLVTSDNSTCDHTFRSASDLNYPSITVTDLKQSYSVSRTVTN 362
            P DYKAFLCSIGYDE+ LHLVT DNSTC+ TF +AS LNYPSITV +LK S+SV+RTVTN
Sbjct: 605  PIDYKAFLCSIGYDEKSLHLVTRDNSTCNQTFTTASSLNYPSITVPNLKDSFSVTRTVTN 664

Query: 363  VGKPKSIYIAVVSAPRGIAVNVVPKRLLFHSYGQKINFTVNFMVTAPSKGYVFGSLAWTN 542
            VGK +S+Y AVVS P GI V VVPK+L+F+SYGQKI FTVNF V APSKGY FG L W +
Sbjct: 665  VGKARSVYKAVVSNPAGINVTVVPKQLIFNSYGQKIKFTVNFKVAAPSKGYAFGFLTWRS 724

Query: 543  KELRVTSPLVVQARSSDSNFSR 608
             + RVTSPLVV+A  S     R
Sbjct: 725  TDARVTSPLVVRAAPSPMGLMR 746


>ref|XP_002317030.1| predicted protein [Populus trichocarpa] gi|222860095|gb|EEE97642.1|
            predicted protein [Populus trichocarpa]
          Length = 726

 Score =  292 bits (747), Expect = 5e-77
 Identities = 143/193 (74%), Positives = 161/193 (83%)
 Frame = +3

Query: 3    PTWSPAAIKSAIMTTATTLSKSGRPITVDPEGRRGNPFDYGSGFVDPLKVLNPGLVYDAQ 182
            P+WSP+AIKSAIMTTAT L K+  PI VDPEGRR N FDYGSGFVDP +VL+PGL+YDA 
Sbjct: 525  PSWSPSAIKSAIMTTATILDKNDEPIRVDPEGRRANSFDYGSGFVDPSRVLDPGLIYDAH 584

Query: 183  PRDYKAFLCSIGYDEELLHLVTSDNSTCDHTFRSASDLNYPSITVTDLKQSYSVSRTVTN 362
            P DYKAFLCSIGYDE+ L LVT DNSTCD TF +AS LNYPSITV +LK S+SV+RTVTN
Sbjct: 585  PIDYKAFLCSIGYDEKSLRLVTRDNSTCDQTFTTASSLNYPSITVPNLKDSFSVTRTVTN 644

Query: 363  VGKPKSIYIAVVSAPRGIAVNVVPKRLLFHSYGQKINFTVNFMVTAPSKGYVFGSLAWTN 542
            VGKP+S+Y AVVS P GI V VVPK+L+F+ YGQKI FTVNF V APSKGY FG L WT+
Sbjct: 645  VGKPRSVYKAVVSNPVGINVTVVPKQLIFNRYGQKIKFTVNFKVAAPSKGYAFGFLTWTS 704

Query: 543  KELRVTSPLVVQA 581
             + RVTSPLVVQA
Sbjct: 705  GDARVTSPLVVQA 717


>ref|XP_002263237.2| PREDICTED: subtilisin-like protease-like [Vitis vinifera]
          Length = 763

 Score =  288 bits (736), Expect = 1e-75
 Identities = 142/202 (70%), Positives = 162/202 (80%)
 Frame = +3

Query: 3    PTWSPAAIKSAIMTTATTLSKSGRPITVDPEGRRGNPFDYGSGFVDPLKVLNPGLVYDAQ 182
            P+WSP+AIKSAIMTTAT L K+ R ITVDPEGR+GN FDYGSGFV+P +VL+PGL+YD +
Sbjct: 562  PSWSPSAIKSAIMTTATILDKNRRSITVDPEGRKGNAFDYGSGFVNPTRVLDPGLIYDTE 621

Query: 183  PRDYKAFLCSIGYDEELLHLVTSDNSTCDHTFRSASDLNYPSITVTDLKQSYSVSRTVTN 362
            P DYKAFLCSIGY E+LLHL+T DNSTCD TF +AS LNYPSITV +LK + SVSRTVTN
Sbjct: 622  PTDYKAFLCSIGYSEKLLHLITRDNSTCDQTFATASALNYPSITVPNLKDNSSVSRTVTN 681

Query: 363  VGKPKSIYIAVVSAPRGIAVNVVPKRLLFHSYGQKINFTVNFMVTAPSKGYVFGSLAWTN 542
            VGKP+SIY AVVSAP GI V VVP RL+F  YGQKINFTV+  V APS  YVFG L+W N
Sbjct: 682  VGKPRSIYKAVVSAPTGINVTVVPHRLIFSHYGQKINFTVHLKVAAPSHSYVFGFLSWRN 741

Query: 543  KELRVTSPLVVQARSSDSNFSR 608
            K  RVTSPLVV+   +     R
Sbjct: 742  KYTRVTSPLVVRVAPTSLGLMR 763


>emb|CBI37484.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  287 bits (735), Expect = 1e-75
 Identities = 141/192 (73%), Positives = 160/192 (83%)
 Frame = +3

Query: 3    PTWSPAAIKSAIMTTATTLSKSGRPITVDPEGRRGNPFDYGSGFVDPLKVLNPGLVYDAQ 182
            P+WSP+AIKSAIMTTAT L K+ R ITVDPEGR+GN FDYGSGFV+P +VL+PGL+YD +
Sbjct: 560  PSWSPSAIKSAIMTTATILDKNRRSITVDPEGRKGNAFDYGSGFVNPTRVLDPGLIYDTE 619

Query: 183  PRDYKAFLCSIGYDEELLHLVTSDNSTCDHTFRSASDLNYPSITVTDLKQSYSVSRTVTN 362
            P DYKAFLCSIGY E+LLHL+T DNSTCD TF +AS LNYPSITV +LK + SVSRTVTN
Sbjct: 620  PTDYKAFLCSIGYSEKLLHLITRDNSTCDQTFATASALNYPSITVPNLKDNSSVSRTVTN 679

Query: 363  VGKPKSIYIAVVSAPRGIAVNVVPKRLLFHSYGQKINFTVNFMVTAPSKGYVFGSLAWTN 542
            VGKP+SIY AVVSAP GI V VVP RL+F  YGQKINFTV+  V APS  YVFG L+W N
Sbjct: 680  VGKPRSIYKAVVSAPTGINVTVVPHRLIFSHYGQKINFTVHLKVAAPSHSYVFGFLSWRN 739

Query: 543  KELRVTSPLVVQ 578
            K  RVTSPLVV+
Sbjct: 740  KYTRVTSPLVVR 751


>ref|XP_002528535.1| Cucumisin precursor, putative [Ricinus communis]
            gi|223532037|gb|EEF33847.1| Cucumisin precursor, putative
            [Ricinus communis]
          Length = 761

 Score =  285 bits (729), Expect = 6e-75
 Identities = 139/196 (70%), Positives = 162/196 (82%)
 Frame = +3

Query: 3    PTWSPAAIKSAIMTTATTLSKSGRPITVDPEGRRGNPFDYGSGFVDPLKVLNPGLVYDAQ 182
            P+WSP+AIKSAIMTTAT L K+ +PITVDP GRRGN FDYGSGFV+P +VL+PGL+YDA 
Sbjct: 560  PSWSPSAIKSAIMTTATILDKNRKPITVDPRGRRGNAFDYGSGFVNPTRVLDPGLIYDAY 619

Query: 183  PRDYKAFLCSIGYDEELLHLVTSDNSTCDHTFRSASDLNYPSITVTDLKQSYSVSRTVTN 362
              DYK+FLCSIGYD++ LHLVT DNSTC+ TF +AS LNYPSIT+ +LK  +SV+R VTN
Sbjct: 620  TTDYKSFLCSIGYDDKSLHLVTRDNSTCNQTFATASSLNYPSITIPNLKDYFSVTRIVTN 679

Query: 363  VGKPKSIYIAVVSAPRGIAVNVVPKRLLFHSYGQKINFTVNFMVTAPSKGYVFGSLAWTN 542
            VGKP+SI+ AVVS P GI V VVPKRL+F SYGQKI FTVNF VTAPSKGY FG L+W N
Sbjct: 680  VGKPRSIFKAVVSNPIGINVTVVPKRLVFDSYGQKITFTVNFKVTAPSKGYAFGILSWRN 739

Query: 543  KELRVTSPLVVQARSS 590
            +   VTSPLVV+  SS
Sbjct: 740  RNTWVTSPLVVRVASS 755


Top