BLASTX nr result

ID: Coptis24_contig00028342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028342
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|4B2G|A Chain A, Crystal Structure Of An Indole-3-acetic Acid...   207   9e-52
emb|CBI22502.3| unnamed protein product [Vitis vinifera]              207   9e-52
ref|XP_002271252.1| PREDICTED: probable indole-3-acetic acid-ami...   207   9e-52
ref|XP_004157348.1| PREDICTED: LOW QUALITY PROTEIN: probable ind...   202   3e-50
ref|XP_004140723.1| PREDICTED: probable indole-3-acetic acid-ami...   202   3e-50

>pdb|4B2G|A Chain A, Crystal Structure Of An Indole-3-acetic Acid Amido
           Synthase From Vitis Vinifera Involved In Auxin
           Homeostasis gi|430800812|pdb|4B2G|B Chain B, Crystal
           Structure Of An Indole-3-acetic Acid Amido Synthase From
           Vitis Vinifera Involved In Auxin Homeostasis
          Length = 609

 Score =  207 bits (526), Expect = 9e-52
 Identities = 98/108 (90%), Positives = 104/108 (96%)
 Frame = -3

Query: 326 VMNLYVPGLDKGKGLYFLFVKSETKTPGGLLARPVLTSYYKSEHFKTRPYDPYMVYTSPD 147
           VMNLYVPGLDKGKGLYFLFVKSET+TPGGLLARPVLTSYYKSEHFKTRPYDPY VYTSP+
Sbjct: 138 VMNLYVPGLDKGKGLYFLFVKSETRTPGGLLARPVLTSYYKSEHFKTRPYDPYNVYTSPN 197

Query: 146 EAILCSDSFQSMYTQMLCGLYHNKEVLRVGAVFASGLLRAIGFLQLNW 3
           EAILC+DSFQSMYTQMLCG+Y  K+VLR+GAVFASGLLRAI FLQLNW
Sbjct: 198 EAILCADSFQSMYTQMLCGIYERKQVLRLGAVFASGLLRAIRFLQLNW 245


>emb|CBI22502.3| unnamed protein product [Vitis vinifera]
          Length = 477

 Score =  207 bits (526), Expect = 9e-52
 Identities = 98/108 (90%), Positives = 104/108 (96%)
 Frame = -3

Query: 326 VMNLYVPGLDKGKGLYFLFVKSETKTPGGLLARPVLTSYYKSEHFKTRPYDPYMVYTSPD 147
           VMNLYVPGLDKGKGLYFLFVKSET+TPGGLLARPVLTSYYKSEHFKTRPYDPY VYTSP+
Sbjct: 138 VMNLYVPGLDKGKGLYFLFVKSETRTPGGLLARPVLTSYYKSEHFKTRPYDPYNVYTSPN 197

Query: 146 EAILCSDSFQSMYTQMLCGLYHNKEVLRVGAVFASGLLRAIGFLQLNW 3
           EAILC+DSFQSMYTQMLCG+Y  K+VLR+GAVFASGLLRAI FLQLNW
Sbjct: 198 EAILCADSFQSMYTQMLCGIYERKQVLRLGAVFASGLLRAIRFLQLNW 245


>ref|XP_002271252.1| PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.1
           [Vitis vinifera]
          Length = 598

 Score =  207 bits (526), Expect = 9e-52
 Identities = 98/108 (90%), Positives = 104/108 (96%)
 Frame = -3

Query: 326 VMNLYVPGLDKGKGLYFLFVKSETKTPGGLLARPVLTSYYKSEHFKTRPYDPYMVYTSPD 147
           VMNLYVPGLDKGKGLYFLFVKSET+TPGGLLARPVLTSYYKSEHFKTRPYDPY VYTSP+
Sbjct: 138 VMNLYVPGLDKGKGLYFLFVKSETRTPGGLLARPVLTSYYKSEHFKTRPYDPYNVYTSPN 197

Query: 146 EAILCSDSFQSMYTQMLCGLYHNKEVLRVGAVFASGLLRAIGFLQLNW 3
           EAILC+DSFQSMYTQMLCG+Y  K+VLR+GAVFASGLLRAI FLQLNW
Sbjct: 198 EAILCADSFQSMYTQMLCGIYERKQVLRLGAVFASGLLRAIRFLQLNW 245


>ref|XP_004157348.1| PREDICTED: LOW QUALITY PROTEIN: probable indole-3-acetic acid-amido
           synthetase GH3.1-like [Cucumis sativus]
          Length = 598

 Score =  202 bits (513), Expect = 3e-50
 Identities = 96/108 (88%), Positives = 102/108 (94%)
 Frame = -3

Query: 326 VMNLYVPGLDKGKGLYFLFVKSETKTPGGLLARPVLTSYYKSEHFKTRPYDPYMVYTSPD 147
           VMNLYVPGLDKGKGLYFLFVKSET+TPGGLLARPVLTSYYKS+HFKTRPYDP+MVYTSP+
Sbjct: 138 VMNLYVPGLDKGKGLYFLFVKSETRTPGGLLARPVLTSYYKSDHFKTRPYDPFMVYTSPN 197

Query: 146 EAILCSDSFQSMYTQMLCGLYHNKEVLRVGAVFASGLLRAIGFLQLNW 3
           EAILC DSFQSMYTQMLCGL    +VLR+GAVFASGLLRAI FLQLNW
Sbjct: 198 EAILCPDSFQSMYTQMLCGLLQRNQVLRLGAVFASGLLRAIRFLQLNW 245


>ref|XP_004140723.1| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.1-like [Cucumis sativus]
          Length = 599

 Score =  202 bits (513), Expect = 3e-50
 Identities = 96/108 (88%), Positives = 102/108 (94%)
 Frame = -3

Query: 326 VMNLYVPGLDKGKGLYFLFVKSETKTPGGLLARPVLTSYYKSEHFKTRPYDPYMVYTSPD 147
           VMNLYVPGLDKGKGLYFLFVKSET+TPGGLLARPVLTSYYKS+HFKTRPYDP+MVYTSP+
Sbjct: 138 VMNLYVPGLDKGKGLYFLFVKSETRTPGGLLARPVLTSYYKSDHFKTRPYDPFMVYTSPN 197

Query: 146 EAILCSDSFQSMYTQMLCGLYHNKEVLRVGAVFASGLLRAIGFLQLNW 3
           EAILC DSFQSMYTQMLCGL    +VLR+GAVFASGLLRAI FLQLNW
Sbjct: 198 EAILCPDSFQSMYTQMLCGLLQRNQVLRLGAVFASGLLRAIRFLQLNW 245


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