BLASTX nr result

ID: Coptis24_contig00028313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028313
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA00144.1| ACS-like protein [Gossypium hirsutum]                  212   3e-53
ref|XP_004149746.1| PREDICTED: long chain acyl-CoA synthetase 4-...   207   7e-52
ref|XP_003524440.1| PREDICTED: long chain acyl-CoA synthetase 4-...   206   1e-51
ref|XP_002509957.1| acyl CoA synthetase, putative [Ricinus commu...   204   5e-51
gb|ACB30545.1| long-chain acyl-CoA synthetase 4 [Ricinus communis]    204   5e-51

>gb|ABA00144.1| ACS-like protein [Gossypium hirsutum]
          Length = 662

 Score =  212 bits (539), Expect = 3e-53
 Identities = 99/130 (76%), Positives = 118/130 (90%)
 Frame = +3

Query: 3   AGLTEKISSGSLIKRKLFDIAHSYKLYNMKKGHKHDEAARLFDGLVFSKVKKGLGGNVRL 182
           +GL +KIS+G L+K+K+FD+A++YK YNMKKG KH EA+ + D +VFSKVK+GLGGNVRL
Sbjct: 330 SGLLQKISAGGLLKKKMFDLAYTYKYYNMKKGRKHGEASPICDKIVFSKVKQGLGGNVRL 389

Query: 183 IISGAAPLSTHVEAFFRVVSCAHVLQGYGLTETCAGTFLSLPNELSMLGTVGPPVPNVDV 362
           I+SGAAPLSTHVE F RVV+C HVLQGYGLTE+CAG+F+SLPNELSMLGTVGPPVPN+DV
Sbjct: 390 ILSGAAPLSTHVEEFLRVVACCHVLQGYGLTESCAGSFVSLPNELSMLGTVGPPVPNIDV 449

Query: 363 RLESVPEMGY 392
           RLESVPEM Y
Sbjct: 450 RLESVPEMNY 459


>ref|XP_004149746.1| PREDICTED: long chain acyl-CoA synthetase 4-like [Cucumis sativus]
           gi|449505070|ref|XP_004162367.1| PREDICTED: long chain
           acyl-CoA synthetase 4-like [Cucumis sativus]
          Length = 660

 Score =  207 bits (527), Expect = 7e-52
 Identities = 100/130 (76%), Positives = 115/130 (88%)
 Frame = +3

Query: 3   AGLTEKISSGSLIKRKLFDIAHSYKLYNMKKGHKHDEAARLFDGLVFSKVKKGLGGNVRL 182
           AGLT+++  G L+KR LF++A S K  NM+KGHKH EA+ + D  VF+KVK+GLGGNVRL
Sbjct: 330 AGLTQRLDQGGLLKRTLFNVAFSRKYGNMQKGHKHSEASPICDRFVFNKVKEGLGGNVRL 389

Query: 183 IISGAAPLSTHVEAFFRVVSCAHVLQGYGLTETCAGTFLSLPNELSMLGTVGPPVPNVDV 362
           I+SGAAPL+THVEAF RVV+CAHVLQGYGLTETCAGTF+SLPNELSMLGTVGPPVPNVDV
Sbjct: 390 ILSGAAPLATHVEAFLRVVACAHVLQGYGLTETCAGTFVSLPNELSMLGTVGPPVPNVDV 449

Query: 363 RLESVPEMGY 392
            LESVPEMGY
Sbjct: 450 CLESVPEMGY 459


>ref|XP_003524440.1| PREDICTED: long chain acyl-CoA synthetase 4-like [Glycine max]
          Length = 665

 Score =  206 bits (525), Expect = 1e-51
 Identities = 97/129 (75%), Positives = 115/129 (89%)
 Frame = +3

Query: 6   GLTEKISSGSLIKRKLFDIAHSYKLYNMKKGHKHDEAARLFDGLVFSKVKKGLGGNVRLI 185
           GLT+KISSGS +K+ +F+ A+SYKL+NM KG  H+EA+ LFD +VF+KVK+GLGGNVR+I
Sbjct: 331 GLTQKISSGSFMKQTMFNFAYSYKLHNMTKGQNHNEASPLFDRIVFNKVKQGLGGNVRII 390

Query: 186 ISGAAPLSTHVEAFFRVVSCAHVLQGYGLTETCAGTFLSLPNELSMLGTVGPPVPNVDVR 365
           +SGAAPLS HVE F RVV+CAH+LQGYGLTETCAGTF+SLPNE  MLGTVGPPVP VDVR
Sbjct: 391 LSGAAPLSRHVEGFLRVVTCAHILQGYGLTETCAGTFVSLPNEKDMLGTVGPPVPYVDVR 450

Query: 366 LESVPEMGY 392
           LES+PEMGY
Sbjct: 451 LESIPEMGY 459


>ref|XP_002509957.1| acyl CoA synthetase, putative [Ricinus communis]
           gi|223549856|gb|EEF51344.1| acyl CoA synthetase,
           putative [Ricinus communis]
          Length = 565

 Score =  204 bits (520), Expect = 5e-51
 Identities = 101/130 (77%), Positives = 114/130 (87%)
 Frame = +3

Query: 3   AGLTEKISSGSLIKRKLFDIAHSYKLYNMKKGHKHDEAARLFDGLVFSKVKKGLGGNVRL 182
           +GLT+KISSG  +K KLF++A+SYKL  MKKG  HDEA+ L D LVF KVK+GLGG VRL
Sbjct: 289 SGLTQKISSGGFLKNKLFNLAYSYKLSCMKKGLAHDEASPLSDKLVFDKVKQGLGGKVRL 348

Query: 183 IISGAAPLSTHVEAFFRVVSCAHVLQGYGLTETCAGTFLSLPNELSMLGTVGPPVPNVDV 362
           I+SGAAPL+ HVEAF RVVSCAHVLQGYGLTETCAGTF+SLPNE++MLGTVGPPVPNVDV
Sbjct: 349 ILSGAAPLAIHVEAFLRVVSCAHVLQGYGLTETCAGTFVSLPNEMAMLGTVGPPVPNVDV 408

Query: 363 RLESVPEMGY 392
            LESVPEM Y
Sbjct: 409 CLESVPEMNY 418


>gb|ACB30545.1| long-chain acyl-CoA synthetase 4 [Ricinus communis]
          Length = 665

 Score =  204 bits (520), Expect = 5e-51
 Identities = 101/130 (77%), Positives = 114/130 (87%)
 Frame = +3

Query: 3   AGLTEKISSGSLIKRKLFDIAHSYKLYNMKKGHKHDEAARLFDGLVFSKVKKGLGGNVRL 182
           +GLT+KISSG  +K KLF++A+SYKL  MKKG  HDEA+ L D LVF KVK+GLGG VRL
Sbjct: 333 SGLTQKISSGGFLKNKLFNLAYSYKLSCMKKGLAHDEASPLSDKLVFDKVKQGLGGKVRL 392

Query: 183 IISGAAPLSTHVEAFFRVVSCAHVLQGYGLTETCAGTFLSLPNELSMLGTVGPPVPNVDV 362
           I+SGAAPL+ HVEAF RVVSCAHVLQGYGLTETCAGTF+SLPNE++MLGTVGPPVPNVDV
Sbjct: 393 ILSGAAPLAIHVEAFLRVVSCAHVLQGYGLTETCAGTFVSLPNEMAMLGTVGPPVPNVDV 452

Query: 363 RLESVPEMGY 392
            LESVPEM Y
Sbjct: 453 CLESVPEMNY 462


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