BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028259
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632409.1| PREDICTED: transcription initiation factor T...    65   6e-09
ref|XP_002275358.1| PREDICTED: transcription initiation factor T...    65   6e-09
gb|AFL48184.1| TBP-associated factor 13 protein [Capsicum annuum]      64   1e-08
ref|XP_002320312.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08
gb|ADU56179.1| transcription initiation factor TFIID subunit [Ja...    62   4e-08

>ref|XP_003632409.1| PREDICTED: transcription initiation factor TFIID subunit 13-like
           [Vitis vinifera] gi|297743959|emb|CBI36929.3| unnamed
           protein product [Vitis vinifera]
          Length = 146

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 31/34 (91%), Positives = 32/34 (94%)
 Frame = +3

Query: 3   DRPKFNRCTELLSMNEELKQARKAFEVDEEKLAT 104
           D PK NRCTELLSMNEELKQARKAF+VDEEKLAT
Sbjct: 111 DLPKLNRCTELLSMNEELKQARKAFDVDEEKLAT 144


>ref|XP_002275358.1| PREDICTED: transcription initiation factor TFIID subunit 13-like
           isoform 3 [Vitis vinifera]
           gi|225437519|ref|XP_002275335.1| PREDICTED:
           transcription initiation factor TFIID subunit 13-like
           isoform 2 [Vitis vinifera]
           gi|225437521|ref|XP_002275286.1| PREDICTED:
           transcription initiation factor TFIID subunit 13-like
           isoform 1 [Vitis vinifera]
           gi|359480146|ref|XP_003632408.1| PREDICTED:
           transcription initiation factor TFIID subunit 13-like
           [Vitis vinifera]
          Length = 128

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 31/34 (91%), Positives = 32/34 (94%)
 Frame = +3

Query: 3   DRPKFNRCTELLSMNEELKQARKAFEVDEEKLAT 104
           D PK NRCTELLSMNEELKQARKAF+VDEEKLAT
Sbjct: 93  DLPKLNRCTELLSMNEELKQARKAFDVDEEKLAT 126


>gb|AFL48184.1| TBP-associated factor 13 protein [Capsicum annuum]
          Length = 130

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 31/33 (93%), Positives = 31/33 (93%)
 Frame = +3

Query: 3   DRPKFNRCTELLSMNEELKQARKAFEVDEEKLA 101
           D PK NRCTELLSMNEELKQARKAFEVDEEKLA
Sbjct: 93  DLPKLNRCTELLSMNEELKQARKAFEVDEEKLA 125


>ref|XP_002320312.1| predicted protein [Populus trichocarpa] gi|222861085|gb|EEE98627.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/36 (83%), Positives = 32/36 (88%)
 Frame = +3

Query: 3   DRPKFNRCTELLSMNEELKQARKAFEVDEEKLATND 110
           D PK NRCTELLSM EELKQARKAFEVDEEKLA+ +
Sbjct: 94  DPPKLNRCTELLSMQEELKQARKAFEVDEEKLASTE 129


>gb|ADU56179.1| transcription initiation factor TFIID subunit [Jatropha curcas]
          Length = 128

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/34 (88%), Positives = 31/34 (91%)
 Frame = +3

Query: 3   DRPKFNRCTELLSMNEELKQARKAFEVDEEKLAT 104
           D PK NRCTELLSM EELKQARKAFEVDEEKLA+
Sbjct: 93  DLPKLNRCTELLSMQEELKQARKAFEVDEEKLAS 126