BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028247
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265047.2| PREDICTED: ribosomal RNA large subunit methy...   110   2e-22
ref|XP_002315078.1| predicted protein [Populus trichocarpa] gi|2...   109   2e-22
ref|XP_003531813.1| PREDICTED: ribosomal RNA large subunit methy...   109   3e-22
dbj|BAJ87268.1| predicted protein [Hordeum vulgare subsp. vulgare]    108   5e-22
gb|AFW70315.1| hypothetical protein ZEAMMB73_858548 [Zea mays]        108   6e-22

>ref|XP_002265047.2| PREDICTED: ribosomal RNA large subunit methyltransferase I-like
           [Vitis vinifera]
          Length = 507

 Score =  110 bits (274), Expect = 2e-22
 Identities = 52/66 (78%), Positives = 59/66 (89%)
 Frame = +3

Query: 3   GGLLMTYSCSGAMTQSGMFLRVMQGAASMAGRKVTVFRQSGAACDHPNDPSYPEDADLSN 182
           GGLLMT SCSGAMTQSG F+R++QGAASMAGRK+T+ RQ+GAACDHP DPSYPE A LSN
Sbjct: 442 GGLLMTCSCSGAMTQSGTFMRILQGAASMAGRKITLLRQAGAACDHPIDPSYPEGAYLSN 501

Query: 183 ILLRVV 200
           IL RV+
Sbjct: 502 ILFRVL 507


>ref|XP_002315078.1| predicted protein [Populus trichocarpa] gi|222864118|gb|EEF01249.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score =  109 bits (273), Expect = 2e-22
 Identities = 54/66 (81%), Positives = 60/66 (90%)
 Frame = +3

Query: 3   GGLLMTYSCSGAMTQSGMFLRVMQGAASMAGRKVTVFRQSGAACDHPNDPSYPEDADLSN 182
           GGLLMT SCSGAMTQSGMFLRV+QGAASMAGRK++V R++GAA DHP DPSYPE A LSN
Sbjct: 322 GGLLMTCSCSGAMTQSGMFLRVLQGAASMAGRKISVLREAGAASDHPIDPSYPEGAYLSN 381

Query: 183 ILLRVV 200
           ILLRV+
Sbjct: 382 ILLRVL 387


>ref|XP_003531813.1| PREDICTED: ribosomal RNA large subunit methyltransferase I-like
           [Glycine max]
          Length = 444

 Score =  109 bits (272), Expect = 3e-22
 Identities = 51/65 (78%), Positives = 60/65 (92%)
 Frame = +3

Query: 3   GGLLMTYSCSGAMTQSGMFLRVMQGAASMAGRKVTVFRQSGAACDHPNDPSYPEDADLSN 182
           GGLLMT SCSGA+TQSG+F+R++QGAASMAGR++TV RQ+GAACDHP DPSYPE A L+N
Sbjct: 379 GGLLMTCSCSGAVTQSGIFMRILQGAASMAGRRITVLRQAGAACDHPIDPSYPEGAYLTN 438

Query: 183 ILLRV 197
           ILLRV
Sbjct: 439 ILLRV 443


>dbj|BAJ87268.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 454

 Score =  108 bits (270), Expect = 5e-22
 Identities = 53/66 (80%), Positives = 58/66 (87%)
 Frame = +3

Query: 3   GGLLMTYSCSGAMTQSGMFLRVMQGAASMAGRKVTVFRQSGAACDHPNDPSYPEDADLSN 182
           GGLLMT SCSGAMTQSG+FL+ +QGAASMAGRKVTV RQ+GAACDHP DPSYPE   LSN
Sbjct: 389 GGLLMTCSCSGAMTQSGLFLKTIQGAASMAGRKVTVLRQAGAACDHPIDPSYPEGQYLSN 448

Query: 183 ILLRVV 200
            LLRV+
Sbjct: 449 YLLRVM 454


>gb|AFW70315.1| hypothetical protein ZEAMMB73_858548 [Zea mays]
          Length = 72

 Score =  108 bits (269), Expect = 6e-22
 Identities = 53/65 (81%), Positives = 57/65 (87%)
 Frame = +3

Query: 3   GGLLMTYSCSGAMTQSGMFLRVMQGAASMAGRKVTVFRQSGAACDHPNDPSYPEDADLSN 182
           GGLLMT SCSGAMTQSGMFL+ +QGAASMAGRKVTV RQ+GAACDHP DP+YPE   LSN
Sbjct: 7   GGLLMTCSCSGAMTQSGMFLKTIQGAASMAGRKVTVLRQAGAACDHPIDPAYPEGQYLSN 66

Query: 183 ILLRV 197
            LLRV
Sbjct: 67  YLLRV 71