BLASTX nr result

ID: Coptis24_contig00028235 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028235
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282549.1| PREDICTED: homocysteine S-methyltransferase ...    62   6e-08
ref|XP_002315941.1| homocysteine s-methyltransferase [Populus tr...    60   2e-07
ref|XP_002875290.1| ATHMT-1/HMT-1 [Arabidopsis lyrata subsp. lyr...    59   3e-07
ref|XP_002531629.1| 5-methyltetrahydrofolate:homocysteine methyl...    59   4e-07
ref|XP_004135092.1| PREDICTED: homocysteine S-methyltransferase ...    59   5e-07

>ref|XP_002282549.1| PREDICTED: homocysteine S-methyltransferase 1 [Vitis vinifera]
           gi|297737821|emb|CBI27022.3| unnamed protein product
           [Vitis vinifera]
          Length = 325

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/30 (90%), Positives = 30/30 (100%)
 Frame = -2

Query: 285 RWRDLGAKLIGGCCRTTPSTIQAISKVLKK 196
           +WRDLGAKLIGGCCRTTPSTI+AISKVLK+
Sbjct: 294 KWRDLGAKLIGGCCRTTPSTIRAISKVLKE 323


>ref|XP_002315941.1| homocysteine s-methyltransferase [Populus trichocarpa]
           gi|222864981|gb|EEF02112.1| homocysteine
           s-methyltransferase [Populus trichocarpa]
          Length = 329

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/29 (93%), Positives = 27/29 (93%)
 Frame = -2

Query: 285 RWRDLGAKLIGGCCRTTPSTIQAISKVLK 199
           RW DLGA LIGGCCRTTPSTIQAISKVLK
Sbjct: 296 RWHDLGASLIGGCCRTTPSTIQAISKVLK 324


>ref|XP_002875290.1| ATHMT-1/HMT-1 [Arabidopsis lyrata subsp. lyrata]
           gi|297321128|gb|EFH51549.1| ATHMT-1/HMT-1 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 326

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/30 (86%), Positives = 29/30 (96%)
 Frame = -2

Query: 285 RWRDLGAKLIGGCCRTTPSTIQAISKVLKK 196
           +WRDLGAKLIGGCCRTTPSTI+AISK LK+
Sbjct: 296 KWRDLGAKLIGGCCRTTPSTIKAISKDLKR 325


>ref|XP_002531629.1| 5-methyltetrahydrofolate:homocysteine methyltransferase, putative
           [Ricinus communis] gi|223528747|gb|EEF30757.1|
           5-methyltetrahydrofolate:homocysteine methyltransferase,
           putative [Ricinus communis]
          Length = 327

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 26/30 (86%), Positives = 28/30 (93%)
 Frame = -2

Query: 285 RWRDLGAKLIGGCCRTTPSTIQAISKVLKK 196
           RW DLGA LIGGCCRTTPSTI+AISKVLK+
Sbjct: 296 RWHDLGANLIGGCCRTTPSTIRAISKVLKE 325


>ref|XP_004135092.1| PREDICTED: homocysteine S-methyltransferase 1-like [Cucumis
           sativus] gi|449493450|ref|XP_004159294.1| PREDICTED:
           homocysteine S-methyltransferase 1-like [Cucumis
           sativus]
          Length = 328

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 25/32 (78%), Positives = 30/32 (93%)
 Frame = -2

Query: 288 ARWRDLGAKLIGGCCRTTPSTIQAISKVLKKS 193
           +RWR+LGA  IGGCCRTTPSTI+A+SKVLK+S
Sbjct: 295 SRWRNLGATFIGGCCRTTPSTIRAVSKVLKES 326


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