BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028234
         (652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284178.1| PREDICTED: cyclin-H1-1 [Vitis vinifera] gi|2...   351   8e-95
gb|AAR07076.1| cyclin H-1 [Oryza sativa Japonica Group]               323   2e-86
gb|AAP03415.1| cyclin H-1 [Oryza sativa Japonica Group]               323   2e-86
ref|NP_001051203.1| Os03g0737600 [Oryza sativa Japonica Group] g...   323   2e-86
ref|XP_003560004.1| PREDICTED: cyclin-H1-1-like [Brachypodium di...   320   1e-85

>ref|XP_002284178.1| PREDICTED: cyclin-H1-1 [Vitis vinifera]
           gi|296089659|emb|CBI39478.3| unnamed protein product
           [Vitis vinifera]
          Length = 335

 Score =  351 bits (900), Expect = 8e-95
 Identities = 173/219 (78%), Positives = 195/219 (89%), Gaps = 3/219 (1%)
 Frame = +3

Query: 3   YGSTRIEVNADGTLTYPETKIDP-NKSEKRS--KPLSIEDEQLMRVFYEQKIQEVCRAFG 173
           YG TRIEV+ADG+L YPE +I   + +EKRS  KPL+ E+E+ MR FYE KIQEVC AF 
Sbjct: 38  YGVTRIEVDADGSLQYPEPQISAKDNAEKRSRPKPLNFEEERFMRSFYEYKIQEVCAAFS 97

Query: 174 FPNKIQGTAIIYFKRFYLQWSVMEHHPKNIMLTCIYTSCKIEENHVSAEELGKGINQDHQ 353
           FP+KIQ TA+IY+KRFYLQWSVMEHHPK+IMLTCIY +CKIEENHVSAEELGKGI QDHQ
Sbjct: 98  FPHKIQATALIYYKRFYLQWSVMEHHPKHIMLTCIYAACKIEENHVSAEELGKGIAQDHQ 157

Query: 354 MILNNEMIVLQGLGFDLIVYAPYRSIEGFIDDIEDFCQAKNDQLQMLKDLQETAKKEVDR 533
           MILNNEMIVLQ L FDLIV+APYRS+EGF+DD+E+FCQAKND+LQMLKDL +TAK EVD+
Sbjct: 158 MILNNEMIVLQSLDFDLIVFAPYRSVEGFVDDMEEFCQAKNDRLQMLKDLHKTAKMEVDK 217

Query: 534 IMLTDAPLLFPPGQLALAALRRSNEVHRVLDFERYLGSI 650
            MLTDAPLLFPPGQLALAALRRSNEVH+VLDFERYL SI
Sbjct: 218 TMLTDAPLLFPPGQLALAALRRSNEVHQVLDFERYLSSI 256


>gb|AAR07076.1| cyclin H-1 [Oryza sativa Japonica Group]
          Length = 328

 Score =  323 bits (828), Expect = 2e-86
 Identities = 156/217 (71%), Positives = 188/217 (86%), Gaps = 1/217 (0%)
 Frame = +3

Query: 3   YGSTRIEVN-ADGTLTYPETKIDPNKSEKRSKPLSIEDEQLMRVFYEQKIQEVCRAFGFP 179
           YG+TR++V+  DG+L+YPE   D        KPLS E+E+LMRVFYEQKIQEVC AF FP
Sbjct: 38  YGTTRLKVDPVDGSLSYPEPAPDHVVGSSGVKPLSCEEERLMRVFYEQKIQEVCSAFKFP 97

Query: 180 NKIQGTAIIYFKRFYLQWSVMEHHPKNIMLTCIYTSCKIEENHVSAEELGKGINQDHQMI 359
           +KIQ TAIIYFKRFYLQWSVMEHHPK+IMLTCIY+SCK+EENHVSAEELGKGI QDHQ+I
Sbjct: 98  HKIQATAIIYFKRFYLQWSVMEHHPKHIMLTCIYSSCKVEENHVSAEELGKGIQQDHQII 157

Query: 360 LNNEMIVLQGLGFDLIVYAPYRSIEGFIDDIEDFCQAKNDQLQMLKDLQETAKKEVDRIM 539
           LNNEMIVL+ L FDLIVYAPYRSIEGF+DD+EDFC+A N + Q L+DL++TA  +VD++M
Sbjct: 158 LNNEMIVLKSLDFDLIVYAPYRSIEGFVDDMEDFCRAGNGEHQRLQDLRQTAISQVDKMM 217

Query: 540 LTDAPLLFPPGQLALAALRRSNEVHRVLDFERYLGSI 650
           LTDAPLL+ PGQLALAAL +SN++H++L+FERYL S+
Sbjct: 218 LTDAPLLYTPGQLALAALHKSNDMHKILNFERYLESV 254


>gb|AAP03415.1| cyclin H-1 [Oryza sativa Japonica Group]
          Length = 328

 Score =  323 bits (828), Expect = 2e-86
 Identities = 156/217 (71%), Positives = 188/217 (86%), Gaps = 1/217 (0%)
 Frame = +3

Query: 3   YGSTRIEVN-ADGTLTYPETKIDPNKSEKRSKPLSIEDEQLMRVFYEQKIQEVCRAFGFP 179
           YG+TR++V+  DG+L+YPE   D        KPLS E+E+LMRVFYEQKIQEVC AF FP
Sbjct: 38  YGTTRLKVDPVDGSLSYPEPAPDHVVGSSGVKPLSCEEERLMRVFYEQKIQEVCSAFKFP 97

Query: 180 NKIQGTAIIYFKRFYLQWSVMEHHPKNIMLTCIYTSCKIEENHVSAEELGKGINQDHQMI 359
           +KIQ TAIIYFKRFYLQWSVMEHHPK+IMLTCIY+SCK+EENHVSAEELGKGI QDHQ+I
Sbjct: 98  HKIQATAIIYFKRFYLQWSVMEHHPKHIMLTCIYSSCKVEENHVSAEELGKGIQQDHQII 157

Query: 360 LNNEMIVLQGLGFDLIVYAPYRSIEGFIDDIEDFCQAKNDQLQMLKDLQETAKKEVDRIM 539
           LNNEMIVL+ L FDLIVYAPYRSIEGF+DD+EDFC+A N + Q L+DL++TA  +VD++M
Sbjct: 158 LNNEMIVLKSLDFDLIVYAPYRSIEGFVDDMEDFCRAGNGEHQRLQDLRQTAISQVDKMM 217

Query: 540 LTDAPLLFPPGQLALAALRRSNEVHRVLDFERYLGSI 650
           LTDAPLL+ PGQLALAAL +SN++H++L+FERYL S+
Sbjct: 218 LTDAPLLYTPGQLALAALHKSNDMHKILNFERYLESV 254


>ref|NP_001051203.1| Os03g0737600 [Oryza sativa Japonica Group]
           gi|122246784|sp|Q10D80.1|CCH11_ORYSJ RecName:
           Full=Cyclin-H1-1; Short=CycH1;1; AltName:
           Full=Cyclin-H-1; Short=CycH-1 gi|9796396|dbj|BAB11694.1|
           cyclin H-1 [Oryza sativa] gi|108710969|gb|ABF98764.1|
           Cyclin, N-terminal domain containing protein, expressed
           [Oryza sativa Japonica Group]
           gi|113549674|dbj|BAF13117.1| Os03g0737600 [Oryza sativa
           Japonica Group] gi|215678822|dbj|BAG95259.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215740606|dbj|BAG97262.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218193718|gb|EEC76145.1| hypothetical protein
           OsI_13435 [Oryza sativa Indica Group]
           gi|222625758|gb|EEE59890.1| hypothetical protein
           OsJ_12494 [Oryza sativa Japonica Group]
          Length = 330

 Score =  323 bits (828), Expect = 2e-86
 Identities = 156/217 (71%), Positives = 188/217 (86%), Gaps = 1/217 (0%)
 Frame = +3

Query: 3   YGSTRIEVN-ADGTLTYPETKIDPNKSEKRSKPLSIEDEQLMRVFYEQKIQEVCRAFGFP 179
           YG+TR++V+  DG+L+YPE   D        KPLS E+E+LMRVFYEQKIQEVC AF FP
Sbjct: 38  YGTTRLKVDPVDGSLSYPEPAPDHVVGSSGVKPLSCEEERLMRVFYEQKIQEVCSAFKFP 97

Query: 180 NKIQGTAIIYFKRFYLQWSVMEHHPKNIMLTCIYTSCKIEENHVSAEELGKGINQDHQMI 359
           +KIQ TAIIYFKRFYLQWSVMEHHPK+IMLTCIY+SCK+EENHVSAEELGKGI QDHQ+I
Sbjct: 98  HKIQATAIIYFKRFYLQWSVMEHHPKHIMLTCIYSSCKVEENHVSAEELGKGIQQDHQII 157

Query: 360 LNNEMIVLQGLGFDLIVYAPYRSIEGFIDDIEDFCQAKNDQLQMLKDLQETAKKEVDRIM 539
           LNNEMIVL+ L FDLIVYAPYRSIEGF+DD+EDFC+A N + Q L+DL++TA  +VD++M
Sbjct: 158 LNNEMIVLKSLDFDLIVYAPYRSIEGFVDDMEDFCRAGNGEHQRLQDLRQTAISQVDKMM 217

Query: 540 LTDAPLLFPPGQLALAALRRSNEVHRVLDFERYLGSI 650
           LTDAPLL+ PGQLALAAL +SN++H++L+FERYL S+
Sbjct: 218 LTDAPLLYTPGQLALAALHKSNDMHKILNFERYLESV 254


>ref|XP_003560004.1| PREDICTED: cyclin-H1-1-like [Brachypodium distachyon]
          Length = 328

 Score =  320 bits (820), Expect = 1e-85
 Identities = 155/217 (71%), Positives = 184/217 (84%), Gaps = 1/217 (0%)
 Frame = +3

Query: 3   YGSTRIEVN-ADGTLTYPETKIDPNKSEKRSKPLSIEDEQLMRVFYEQKIQEVCRAFGFP 179
           YG+TR++V+  DG+++YPE   D        KPLS E+EQLMRVFYEQKIQEVC AF FP
Sbjct: 38  YGTTRLKVDPVDGSISYPEPAPDHVVGSSSVKPLSCEEEQLMRVFYEQKIQEVCAAFKFP 97

Query: 180 NKIQGTAIIYFKRFYLQWSVMEHHPKNIMLTCIYTSCKIEENHVSAEELGKGINQDHQMI 359
           +KIQ TAIIYFKRFYLQWSVMEHHPK+IMLTC+Y+SCK+EENHVSAEELGKGI QDHQ+I
Sbjct: 98  HKIQATAIIYFKRFYLQWSVMEHHPKHIMLTCVYSSCKVEENHVSAEELGKGIQQDHQII 157

Query: 360 LNNEMIVLQGLGFDLIVYAPYRSIEGFIDDIEDFCQAKNDQLQMLKDLQETAKKEVDRIM 539
           LNNEMIVL+ L FDLIVYAPYR IEGFIDD++ FC+A N   Q LK+L +TA   VD++M
Sbjct: 158 LNNEMIVLKSLDFDLIVYAPYRPIEGFIDDMDGFCKAGNGAHQRLKELHQTANSHVDKMM 217

Query: 540 LTDAPLLFPPGQLALAALRRSNEVHRVLDFERYLGSI 650
           LTDAPLL+ PGQLALAAL +SN++H+VL+FERYLGS+
Sbjct: 218 LTDAPLLYSPGQLALAALSKSNDMHQVLNFERYLGSV 254