BLASTX nr result

ID: Coptis24_contig00028221 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028221
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314926.1| predicted protein [Populus trichocarpa] gi|2...    56   4e-06

>ref|XP_002314926.1| predicted protein [Populus trichocarpa] gi|222863966|gb|EEF01097.1|
           predicted protein [Populus trichocarpa]
          Length = 915

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 31/98 (31%), Positives = 49/98 (50%)
 Frame = +1

Query: 157 LHEINTLEWNDLVVSDNLDEIPASAKGYVPSDKHDQYETNDFARNGTFLGSSNMYGATSC 336
           LHE+NTLEW++LV +D  + IP         D+ +Q   N    +G  L   ++    S 
Sbjct: 202 LHELNTLEWDELVTNDPGNLIPPGGDKIPCFDRQNQIAVNGSVNDGGILSGYHLSAEMST 261

Query: 337 LRNQIKLMAGNGSLDSELPTCSYSEVTGDEMNSYAKEK 450
           L N  K +  +G+     P   YS++T  ++NS A+ K
Sbjct: 262 LGNLTKSIVRSGNTQFNSPDSVYSQLTSAQVNSDAQRK 299


Top