BLASTX nr result

ID: Coptis24_contig00028204 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028204
         (1255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277380.2| PREDICTED: aspartic proteinase nepenthesin-2...   290   5e-76
ref|XP_003635520.1| PREDICTED: aspartic proteinase nepenthesin-2...   285   2e-74
gb|ABK95598.1| unknown [Populus trichocarpa]                          284   4e-74
ref|XP_003546221.1| PREDICTED: aspartic proteinase nepenthesin-2...   275   2e-71
ref|XP_003534754.1| PREDICTED: aspartic proteinase nepenthesin-2...   272   2e-70

>ref|XP_002277380.2| PREDICTED: aspartic proteinase nepenthesin-2-like, partial [Vitis
            vinifera]
          Length = 358

 Score =  290 bits (742), Expect = 5e-76
 Identities = 164/352 (46%), Positives = 219/352 (62%), Gaps = 9/352 (2%)
 Frame = -2

Query: 1029 IQLTLYHVHRTSSS---------SNLLVRDEARVQSFNYRRSILKSNTKIHXXXXXXXXX 877
            +Q+T++HVH   SS         S++L  D+ARV++ N R  + + +T+           
Sbjct: 40   VQMTIHHVHGPGSSLAPQPPVSFSDVLAWDDARVKTLNSR--LTRKDTRF---------- 87

Query: 876  XXXXXXXXXXXXXTVLANRAKANSVGGGVDIGLNPGTSIGVANYYVKMGLGTPVNYYDMI 697
                         +VL    K       V + LNPG SIG  NYYVK+G G+P  YY MI
Sbjct: 88   -----------PKSVLTK--KDIRFPKSVSVPLNPGASIGSGNYYVKVGFGSPARYYSMI 134

Query: 696  VDTGSSLTWLQCKPCAVYCHPQAGPMYDPSTSTTHKYVTCSTSQCSALEAATLNPPMCSM 517
            VDTGSSL+WLQCKPC VYCH QA P++DPS S T+K ++C++SQCS+L  ATLN P+C  
Sbjct: 135  VDTGSSLSWLQCKPCVVYCHVQADPLFDPSASKTYKSLSCTSSQCSSLVDATLNNPLCET 194

Query: 516  LTNWCLYEASYGDHSYSIGYLTRDTMTLSSTSKPTLPGFVYGCGEDTQGLFGRSAGLIGF 337
             +N C+Y ASYGD SYS+GYL++D +TL+ +   TLPGFVYGCG+D+ GLFGR+AG++G 
Sbjct: 195  SSNVCVYTASYGDSSYSMGYLSQDLLTLAPSQ--TLPGFVYGCGQDSDGLFGRAAGILGL 252

Query: 336  ARNSLSLSAQLAPKYGYAFAYCLXXXXXXXXXXSQNRTGILTIGASLSYNYTNTETLANL 157
             RN LS+  Q++ K+GYAF+YCL          ++   G L+IG +         +LA  
Sbjct: 253  GRNKLSMLGQVSSKFGYAFSYCL---------PTRGGGGFLSIGKA---------SLAGS 294

Query: 156  AVPYQFTPMITDPDDPSLYYLRWTGMTVSGEPLNGVPPLRYRETSTIIDSGT 1
            A  Y+FTPM TDP +PSLY+LR T +TV G  L GV   +YR   TIIDSGT
Sbjct: 295  A--YKFTPMTTDPGNPSLYFLRLTAITVGGRAL-GVAAAQYR-VPTIIDSGT 342


>ref|XP_003635520.1| PREDICTED: aspartic proteinase nepenthesin-2-like, partial [Vitis
           vinifera]
          Length = 354

 Score =  285 bits (728), Expect = 2e-74
 Identities = 145/260 (55%), Positives = 186/260 (71%)
 Frame = -2

Query: 780 LNPGTSIGVANYYVKMGLGTPVNYYDMIVDTGSSLTWLQCKPCAVYCHPQAGPMYDPSTS 601
           LNPG SIG  NYYVK+GLG+P  YY MIVDTGSSL+WLQCKPC VYCH QA P++DPS S
Sbjct: 2   LNPGASIGSGNYYVKVGLGSPARYYSMIVDTGSSLSWLQCKPCVVYCHVQADPLFDPSAS 61

Query: 600 TTHKYVTCSTSQCSALEAATLNPPMCSMLTNWCLYEASYGDHSYSIGYLTRDTMTLSSTS 421
            T+K ++C++SQCS+L  ATLN P+C   +N C+Y ASYGD SYS+GYL++D +TL+ + 
Sbjct: 62  KTYKSLSCTSSQCSSLVDATLNNPLCETSSNVCVYTASYGDSSYSMGYLSQDLLTLAPSQ 121

Query: 420 KPTLPGFVYGCGEDTQGLFGRSAGLIGFARNSLSLSAQLAPKYGYAFAYCLXXXXXXXXX 241
             TLPGFVYGCG+D++GLFGR+AG++G  RN LS+  Q++ K+GYAF+YCL         
Sbjct: 122 --TLPGFVYGCGQDSEGLFGRAAGILGLGRNKLSMLGQVSSKFGYAFSYCL--------- 170

Query: 240 XSQNRTGILTIGASLSYNYTNTETLANLAVPYQFTPMITDPDDPSLYYLRWTGMTVSGEP 61
            ++   G L+IG +         +LA  A  Y+FTPM TDP +PSLY+LR T +TV G  
Sbjct: 171 PTRGGGGFLSIGKA---------SLAGSA--YKFTPMTTDPGNPSLYFLRLTAITVGGRA 219

Query: 60  LNGVPPLRYRETSTIIDSGT 1
           L GV   +YR   TIIDSGT
Sbjct: 220 L-GVAAAQYR-VPTIIDSGT 237


>gb|ABK95598.1| unknown [Populus trichocarpa]
          Length = 471

 Score =  284 bits (726), Expect = 4e-74
 Identities = 166/359 (46%), Positives = 213/359 (59%), Gaps = 14/359 (3%)
 Frame = -2

Query: 1035 SGIQLTLYHVHRTSSS---------SNLLVRDEARVQSFNYRRSILKSNTKIHXXXXXXX 883
            S I L +YHVH   SS         S++L+ DE  V++ + R +                
Sbjct: 44   SSIHLNIYHVHGHGSSLTPNSSSLLSDVLLHDEEHVKALSDRLA---------------- 87

Query: 882  XXXXXXXXXXXXXXXTVLANRAKANSVG-----GGVDIGLNPGTSIGVANYYVKMGLGTP 718
                            + +  AK    G         I LNPG SIG  NYYVK+GLGTP
Sbjct: 88   -------------NKGLGSGSAKPPKSGHLLEPNSASIPLNPGLSIGSGNYYVKLGLGTP 134

Query: 717  VNYYDMIVDTGSSLTWLQCKPCAVYCHPQAGPMYDPSTSTTHKYVTCSTSQCSALEAATL 538
              YY MI+DTGSSL+WLQC+PCAVYCH QA P+YDPS S T+K ++C++ +CS L+AATL
Sbjct: 135  PKYYAMILDTGSSLSWLQCQPCAVYCHAQADPLYDPSVSKTYKKLSCASVECSRLKAATL 194

Query: 537  NPPMCSMLTNWCLYEASYGDHSYSIGYLTRDTMTLSSTSKPTLPGFVYGCGEDTQGLFGR 358
            N P+C   +N CLY ASYGD S+SIGYL++D +TL  TS  TLP F YGCG+D QGLFGR
Sbjct: 195  NDPLCETDSNACLYTASYGDTSFSIGYLSQDLLTL--TSSQTLPQFTYGCGQDNQGLFGR 252

Query: 357  SAGLIGFARNSLSLSAQLAPKYGYAFAYCLXXXXXXXXXXSQNRTGILTIGASLSYNYTN 178
            +AG+IG AR+ LS+ AQL+ KYG+AF+YCL            +  G L+IG S+S     
Sbjct: 253  AAGIIGLARDKLSMLAQLSTKYGHAFSYCL-----PTANSGSSGGGFLSIG-SIS----- 301

Query: 177  TETLANLAVPYQFTPMITDPDDPSLYYLRWTGMTVSGEPLNGVPPLRYRETSTIIDSGT 1
                      Y+FTPM+TD  +PSLY+LR T +TVSG PL+ +    YR   T+IDSGT
Sbjct: 302  -------PTSYKFTPMLTDSKNPSLYFLRLTAITVSGRPLD-LAAAMYR-VPTLIDSGT 351


>ref|XP_003546221.1| PREDICTED: aspartic proteinase nepenthesin-2-like [Glycine max]
          Length = 457

 Score =  275 bits (702), Expect = 2e-71
 Identities = 157/355 (44%), Positives = 215/355 (60%), Gaps = 11/355 (3%)
 Frame = -2

Query: 1032 GIQLTLYHVHRTSSS---------SNLLVRDEARVQSFNYRRSILKSNTKIHXXXXXXXX 880
            G+QL LYHV    SS         S+++ +DE RV+  + R +  +S             
Sbjct: 30   GMQLNLYHVKGLDSSQTSTSPFSFSDMITKDEERVRFLHSRLTNKES------------- 76

Query: 879  XXXXXXXXXXXXXXTVLANRAKANSVGGG--VDIGLNPGTSIGVANYYVKMGLGTPVNYY 706
                             +N A  + +GG   V   L  G SIG  NYYVK+G+GTP  Y+
Sbjct: 77   ----------------ASNSATTDKLGGPSLVSTPLKSGLSIGSGNYYVKIGVGTPAKYF 120

Query: 705  DMIVDTGSSLTWLQCKPCAVYCHPQAGPMYDPSTSTTHKYVTCSTSQCSALEAATLNPPM 526
             MIVDTGSSL+WLQC+PC +YCH Q  P++ PS S T+K ++CS+SQCS+L+++TLN P 
Sbjct: 121  SMIVDTGSSLSWLQCQPCVIYCHVQVDPIFTPSVSKTYKALSCSSSQCSSLKSSTLNAPG 180

Query: 525  CSMLTNWCLYEASYGDHSYSIGYLTRDTMTLSSTSKPTLPGFVYGCGEDTQGLFGRSAGL 346
            CS  T  C+Y+ASYGD S+SIGYL++D +TL+ ++ P+  GFVYGCG+D QGLFGRSAG+
Sbjct: 181  CSNATGACVYKASYGDTSFSIGYLSQDVLTLTPSAAPS-SGFVYGCGQDNQGLFGRSAGI 239

Query: 345  IGFARNSLSLSAQLAPKYGYAFAYCLXXXXXXXXXXSQNRTGILTIGASLSYNYTNTETL 166
            IG A + LS+  QL+ KYG AF+YCL          + + +G L+IGAS           
Sbjct: 240  IGLANDKLSMLGQLSNKYGNAFSYCL--PSSFSAQPNSSVSGFLSIGAS----------- 286

Query: 165  ANLAVPYQFTPMITDPDDPSLYYLRWTGMTVSGEPLNGVPPLRYRETSTIIDSGT 1
            +  + PY+FTP++ +P  PSLY+L  T +TV+G+PL GV    Y    TIIDSGT
Sbjct: 287  SLSSSPYKFTPLVKNPKIPSLYFLGLTTITVAGKPL-GVSASSY-NVPTIIDSGT 339


>ref|XP_003534754.1| PREDICTED: aspartic proteinase nepenthesin-2-like [Glycine max]
          Length = 463

 Score =  272 bits (695), Expect = 2e-70
 Identities = 159/372 (42%), Positives = 219/372 (58%), Gaps = 13/372 (3%)
 Frame = -2

Query: 1077 IEVQKNHHDHGEIDSGIQLTLYHVHRTSSS---------SNLLVRDEARVQSFNYRRSIL 925
            +E Q N +   +   G+QL LYHV    SS         S+++ +DE RV+  + R +  
Sbjct: 20   VEFQDNDNPRQK-QEGMQLNLYHVKGLDSSQTSTSPFSFSDMITKDEERVRFLHSRLTNK 78

Query: 924  KSNTKIHXXXXXXXXXXXXXXXXXXXXXXTVLANRAKANSVGGGVDI----GLNPGTSIG 757
            +S                             + N A  + + GG  +     L  G SIG
Sbjct: 79   ES-----------------------------VRNSATTDKLRGGPSLVSTTPLKSGLSIG 109

Query: 756  VANYYVKMGLGTPVNYYDMIVDTGSSLTWLQCKPCAVYCHPQAGPMYDPSTSTTHKYVTC 577
              NYYVK+GLGTP  Y+ MIVDTGSSL+WLQC+PC +YCH Q  P++ PSTS T+K + C
Sbjct: 110  SGNYYVKIGLGTPAKYFSMIVDTGSSLSWLQCQPCVIYCHVQVDPIFTPSTSKTYKALPC 169

Query: 576  STSQCSALEAATLNPPMCSMLTNWCLYEASYGDHSYSIGYLTRDTMTLSSTSKPTLPGFV 397
            S+SQCS+L+++TLN P CS  T  C+Y+ASYGD S+SIGYL++D +TL+ +  P+  GFV
Sbjct: 170  SSSQCSSLKSSTLNAPGCSNATGACVYKASYGDTSFSIGYLSQDVLTLTPSEAPS-SGFV 228

Query: 396  YGCGEDTQGLFGRSAGLIGFARNSLSLSAQLAPKYGYAFAYCLXXXXXXXXXXSQNRTGI 217
            YGCG+D QGLFGRS+G+IG A + +S+  QL+ KYG AF+YCL          S + +G 
Sbjct: 229  YGCGQDNQGLFGRSSGIIGLANDKISMLGQLSKKYGNAFSYCL--PSSFSAPNSSSLSGF 286

Query: 216  LTIGASLSYNYTNTETLANLAVPYQFTPMITDPDDPSLYYLRWTGMTVSGEPLNGVPPLR 37
            L+IGAS           +  + PY+FTP++ +   PSLY+L  T +TV+G+PL GV    
Sbjct: 287  LSIGAS-----------SLTSSPYKFTPLVKNQKIPSLYFLDLTTITVAGKPL-GVSASS 334

Query: 36   YRETSTIIDSGT 1
            Y    TIIDSGT
Sbjct: 335  Y-NVPTIIDSGT 345


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