BLASTX nr result

ID: Coptis24_contig00028184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028184
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81180.1| hypothetical protein VITISV_012787 [Vitis vinifera]    86   2e-15
ref|XP_002282137.2| PREDICTED: ABC transporter B family member 1...    86   4e-15
ref|XP_003526190.1| PREDICTED: putative multidrug resistance pro...    67   1e-09
ref|XP_002515049.1| multidrug resistance protein 1, 2, putative ...    67   1e-09
ref|XP_002522840.1| multidrug resistance protein 1, 2, putative ...    65   6e-09

>emb|CAN81180.1| hypothetical protein VITISV_012787 [Vitis vinifera]
          Length = 1245

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/102 (43%), Positives = 64/102 (62%)
 Frame = +3

Query: 9   EASDPSYLPPEGSHHGRTKSSLPPFNVRSSIPNTPTYSISPAWIFSSGTPPISMTRSFTQ 188
           +++   Y P +G+ H RT S+  P +V SS+P++P +  SPA+        ISM  S  Q
Sbjct: 589 QSNSSFYRPADGTSHSRTMSAQTPVSVTSSLPSSPAFLFSPAF-------SISMAPSI-Q 640

Query: 189 SHTFDDKDDKTLNSPSHSPPVQWRLLQLNAPEWKRTLLGCIG 314
            H++D+ D + L   S+ PP QWRL+++N PEWKR LLGCIG
Sbjct: 641 LHSYDESDSENLEKSSY-PPWQWRLVKMNLPEWKRGLLGCIG 681


>ref|XP_002282137.2| PREDICTED: ABC transporter B family member 15-like [Vitis vinifera]
          Length = 1245

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 43/102 (42%), Positives = 64/102 (62%)
 Frame = +3

Query: 9   EASDPSYLPPEGSHHGRTKSSLPPFNVRSSIPNTPTYSISPAWIFSSGTPPISMTRSFTQ 188
           +++   Y P +G+ H RT S+  P +V SS+P++P +  SPA+        ISM  S  Q
Sbjct: 589 QSNSSFYRPADGTSHSRTMSAQTPVSVTSSLPSSPAFLFSPAF-------SISMAPSI-Q 640

Query: 189 SHTFDDKDDKTLNSPSHSPPVQWRLLQLNAPEWKRTLLGCIG 314
            H++D+ D + L   S+ PP QWRL+++N PEWKR L+GCIG
Sbjct: 641 LHSYDESDSENLEKSSY-PPWQWRLVKMNLPEWKRGLIGCIG 681


>ref|XP_003526190.1| PREDICTED: putative multidrug resistance protein-like [Glycine max]
          Length = 1243

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 45/109 (41%), Positives = 55/109 (50%), Gaps = 5/109 (4%)
 Frame = +3

Query: 3   QNEASDPSYLPPEGSHHGRTK-SSLPPFNVRSSIPNTPT-YSISPAWIFSSGTPPISMTR 176
           QN+ S PS L  EG    RT     P  + RSS   TP  Y  S    FS GTP      
Sbjct: 581 QNDESKPSNLLTEGKSSHRTSIPQSPTVSFRSSTVGTPMLYPFSQG--FSMGTP------ 632

Query: 177 SFTQSHTFDDKDDK---TLNSPSHSPPVQWRLLQLNAPEWKRTLLGCIG 314
            ++ S  +D  DD     L  P+H  P QWRLL++NAPEW R +LG +G
Sbjct: 633 -YSYSIQYDPDDDSFEDNLKRPNHPAPSQWRLLKMNAPEWGRAMLGILG 680


>ref|XP_002515049.1| multidrug resistance protein 1, 2, putative [Ricinus communis]
           gi|223546100|gb|EEF47603.1| multidrug resistance protein
           1, 2, putative [Ricinus communis]
          Length = 1271

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 2/106 (1%)
 Frame = +3

Query: 3   QNEASDPSYLPPEGSHHGRTKSSLPPFN--VRSSIPNTPTYSISPAWIFSSGTPPISMTR 176
           Q E     Y P +G++H R  S   P +  V+SS  ++P  + SP  +FS     ISM  
Sbjct: 610 QGENFYSPYSPTKGTNHRRLHSVHTPLHTSVKSSYHSSPASAFSP--VFS-----ISMAH 662

Query: 177 SFTQSHTFDDKDDKTLNSPSHSPPVQWRLLQLNAPEWKRTLLGCIG 314
           +  Q  +++++    LN+   +PP QWR+L++NAPEWKR  LGC+G
Sbjct: 663 T-VQIPSYNEQIAPNLNNSFRTPPSQWRVLKMNAPEWKRAFLGCLG 707


>ref|XP_002522840.1| multidrug resistance protein 1, 2, putative [Ricinus communis]
           gi|223537924|gb|EEF39538.1| multidrug resistance protein
           1, 2, putative [Ricinus communis]
          Length = 1217

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 39/107 (36%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
 Frame = +3

Query: 3   QNEASDPSYLPPEGSHHGRTKSSLPPFNVRSSIPNTPT-YSISPAWIFSSGTPPISMTRS 179
           +NEA        +G +  +T ++  P ++RSS  NTP  Y  SPA  FS GTP       
Sbjct: 590 ENEAPSDFGYNNDGRNFHKTNAAPSPISIRSSAQNTPVLYPFSPA--FSFGTP------- 640

Query: 180 FTQSHTFDDKDDKT---LNSPSHSPPVQWRLLQLNAPEWKRTLLGCI 311
           ++ S  +D  DD     +    +  P QWRLL++NAPEW R  +GC+
Sbjct: 641 YSYSVPYDPDDDSVEDDMKRLDYPAPSQWRLLKMNAPEWGRAFIGCL 687