BLASTX nr result

ID: Coptis24_contig00028181 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028181
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30138.3| unnamed protein product [Vitis vinifera]              114   6e-24
ref|XP_002266505.1| PREDICTED: ABC transporter B family member 1...   114   6e-24
ref|XP_004173903.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...   111   5e-23
ref|XP_004173442.1| PREDICTED: ABC transporter B family member 1...   111   5e-23
ref|XP_004137839.1| PREDICTED: ABC transporter B family member 1...   111   5e-23

>emb|CBI30138.3| unnamed protein product [Vitis vinifera]
          Length = 999

 Score =  114 bits (286), Expect = 6e-24
 Identities = 56/78 (71%), Positives = 61/78 (78%)
 Frame = +2

Query: 2   RLEKLAFKKQASSFWRLVKMNSPEWKYALXXXXXXXXXXXXXALFAYVLSAVLSVYYSQD 181
           RLEKLAFK+QASSFWRL KMNSPEW YAL             A FAYVLSAVLSVYY+Q+
Sbjct: 661 RLEKLAFKEQASSFWRLAKMNSPEWVYALFGTIGSVVCGSISAFFAYVLSAVLSVYYNQN 720

Query: 182 HAYMRREIGKYCYLLIGV 235
           HAYM ++IGKYCYLLIGV
Sbjct: 721 HAYMSKQIGKYCYLLIGV 738


>ref|XP_002266505.1| PREDICTED: ABC transporter B family member 1-like [Vitis vinifera]
          Length = 1354

 Score =  114 bits (286), Expect = 6e-24
 Identities = 56/78 (71%), Positives = 61/78 (78%)
 Frame = +2

Query: 2   RLEKLAFKKQASSFWRLVKMNSPEWKYALXXXXXXXXXXXXXALFAYVLSAVLSVYYSQD 181
           RLEKLAFK+QASSFWRL KMNSPEW YAL             A FAYVLSAVLSVYY+Q+
Sbjct: 736 RLEKLAFKEQASSFWRLAKMNSPEWVYALFGTIGSVVCGSISAFFAYVLSAVLSVYYNQN 795

Query: 182 HAYMRREIGKYCYLLIGV 235
           HAYM ++IGKYCYLLIGV
Sbjct: 796 HAYMSKQIGKYCYLLIGV 813


>ref|XP_004173903.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter B family member
           1-like, partial [Cucumis sativus]
          Length = 703

 Score =  111 bits (278), Expect = 5e-23
 Identities = 56/78 (71%), Positives = 60/78 (76%)
 Frame = +2

Query: 2   RLEKLAFKKQASSFWRLVKMNSPEWKYALXXXXXXXXXXXXXALFAYVLSAVLSVYYSQD 181
           RLEKLAFK+QASSFWRLVKMNSPEW YAL             A FAYVLSAVLSVYY+ D
Sbjct: 116 RLEKLAFKEQASSFWRLVKMNSPEWLYALLGSIGSVVCGFLSAFFAYVLSAVLSVYYNPD 175

Query: 182 HAYMRREIGKYCYLLIGV 235
           HA+M REI KYCYLLIG+
Sbjct: 176 HAFMSREIIKYCYLLIGL 193


>ref|XP_004173442.1| PREDICTED: ABC transporter B family member 1-like, partial [Cucumis
           sativus]
          Length = 699

 Score =  111 bits (278), Expect = 5e-23
 Identities = 56/78 (71%), Positives = 60/78 (76%)
 Frame = +2

Query: 2   RLEKLAFKKQASSFWRLVKMNSPEWKYALXXXXXXXXXXXXXALFAYVLSAVLSVYYSQD 181
           RLEKLAFK+QASSFWRLVKMNSPEW YAL             A FAYVLSAVLSVYY+ D
Sbjct: 353 RLEKLAFKEQASSFWRLVKMNSPEWLYALLGSIGSVVCGFLSAFFAYVLSAVLSVYYNPD 412

Query: 182 HAYMRREIGKYCYLLIGV 235
           HA+M REI KYCYLLIG+
Sbjct: 413 HAFMSREIIKYCYLLIGL 430


>ref|XP_004137839.1| PREDICTED: ABC transporter B family member 1-like [Cucumis sativus]
          Length = 1361

 Score =  111 bits (278), Expect = 5e-23
 Identities = 56/78 (71%), Positives = 60/78 (76%)
 Frame = +2

Query: 2   RLEKLAFKKQASSFWRLVKMNSPEWKYALXXXXXXXXXXXXXALFAYVLSAVLSVYYSQD 181
           RLEKLAFK+QASSFWRLVKMNSPEW YAL             A FAYVLSAVLSVYY+ D
Sbjct: 743 RLEKLAFKEQASSFWRLVKMNSPEWLYALLGSIGSVVCGFLSAFFAYVLSAVLSVYYNPD 802

Query: 182 HAYMRREIGKYCYLLIGV 235
           HA+M REI KYCYLLIG+
Sbjct: 803 HAFMSREIIKYCYLLIGL 820


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