BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028179
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274185.2| PREDICTED: uncharacterized protein LOC100242...   169   2e-40
emb|CBI29073.3| unnamed protein product [Vitis vinifera]              169   2e-40
ref|NP_193700.2| Mitochondrial transcription termination factor ...   162   3e-38
emb|CAA19682.1| putative protein [Arabidopsis thaliana] gi|72687...   162   3e-38
ref|XP_002332130.1| predicted protein [Populus trichocarpa] gi|2...   159   2e-37

>ref|XP_002274185.2| PREDICTED: uncharacterized protein LOC100242606 [Vitis vinifera]
          Length = 564

 Score =  169 bits (429), Expect = 2e-40
 Identities = 88/163 (53%), Positives = 108/163 (66%)
 Frame = +2

Query: 2   ESLGLSQTELLSSLPRKLMFLSDDNVMLENYSALCSYGIPRNKIGRMYKEVRDIFGYNEG 181
           ESLGL+ +E+ + LPR LMFLSDD VM+ENY  LC YGI R+ IGRMYKEV+ IF Y  G
Sbjct: 123 ESLGLAPSEISALLPRNLMFLSDDCVMIENYHVLCDYGIARSSIGRMYKEVQAIFRYELG 182

Query: 182 VLALKLQGYEKLGLSAPTVIKLVSCSPSLLVSGVNEDFXXXXXXXXXXXXSSDWFVGHLS 361
           +L  K++ YE LGLS  TVIKLVSC P LLV GVN  F             SDW  G+LS
Sbjct: 183 LLGSKVRAYEGLGLSRSTVIKLVSCCPWLLVGGVNSQFVMVLKRVKGLGFESDWIGGYLS 242

Query: 362 YESVYDWSKMHDMMCFLEKLGCSKKDIGRLFEINTAFLIENSG 490
            +S Y+W +MHD + FLEK+G S++ +  LF+ N   L E SG
Sbjct: 243 GKSSYNWKRMHDTIDFLEKVGYSEEQMVSLFKTNPELLFEGSG 285


>emb|CBI29073.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  169 bits (429), Expect = 2e-40
 Identities = 88/163 (53%), Positives = 108/163 (66%)
 Frame = +2

Query: 2   ESLGLSQTELLSSLPRKLMFLSDDNVMLENYSALCSYGIPRNKIGRMYKEVRDIFGYNEG 181
           ESLGL+ +E+ + LPR LMFLSDD VM+ENY  LC YGI R+ IGRMYKEV+ IF Y  G
Sbjct: 222 ESLGLAPSEISALLPRNLMFLSDDCVMIENYHVLCDYGIARSSIGRMYKEVQAIFRYELG 281

Query: 182 VLALKLQGYEKLGLSAPTVIKLVSCSPSLLVSGVNEDFXXXXXXXXXXXXSSDWFVGHLS 361
           +L  K++ YE LGLS  TVIKLVSC P LLV GVN  F             SDW  G+LS
Sbjct: 282 LLGSKVRAYEGLGLSRSTVIKLVSCCPWLLVGGVNSQFVMVLKRVKGLGFESDWIGGYLS 341

Query: 362 YESVYDWSKMHDMMCFLEKLGCSKKDIGRLFEINTAFLIENSG 490
            +S Y+W +MHD + FLEK+G S++ +  LF+ N   L E SG
Sbjct: 342 GKSSYNWKRMHDTIDFLEKVGYSEEQMVSLFKTNPELLFEGSG 384


>ref|NP_193700.2| Mitochondrial transcription termination factor family protein
           [Arabidopsis thaliana] gi|332658810|gb|AEE84210.1|
           Mitochondrial transcription termination factor family
           protein [Arabidopsis thaliana]
          Length = 575

 Score =  162 bits (409), Expect = 3e-38
 Identities = 81/163 (49%), Positives = 105/163 (64%)
 Frame = +2

Query: 2   ESLGLSQTELLSSLPRKLMFLSDDNVMLENYSALCSYGIPRNKIGRMYKEVRDIFGYNEG 181
           ESLGL   E  + LPRKLMFLSDD +M EN+ ALC+YGIPR KIGRMYKE R+IF Y  G
Sbjct: 135 ESLGLCPYEFETFLPRKLMFLSDDGIMFENFHALCNYGIPRGKIGRMYKEAREIFRYESG 194

Query: 182 VLALKLQGYEKLGLSAPTVIKLVSCSPSLLVSGVNEDFXXXXXXXXXXXXSSDWFVGHLS 361
           +LA+KL+GYE LGLS  TVIKLV+  P LLV G++ +F              DW   +LS
Sbjct: 195 MLAMKLRGYENLGLSKATVIKLVTSCPLLLVGGIDAEFSSVVDKLKGLQVGCDWLGRYLS 254

Query: 362 YESVYDWSKMHDMMCFLEKLGCSKKDIGRLFEINTAFLIENSG 490
               Y W ++ + + FL+K+GC ++ +  L +   A +IE SG
Sbjct: 255 DRKTYSWRRILETIEFLDKVGCKEEKLSSLLKTYPALVIEGSG 297


>emb|CAA19682.1| putative protein [Arabidopsis thaliana] gi|7268761|emb|CAB78967.1|
           putative protein [Arabidopsis thaliana]
          Length = 557

 Score =  162 bits (409), Expect = 3e-38
 Identities = 81/163 (49%), Positives = 105/163 (64%)
 Frame = +2

Query: 2   ESLGLSQTELLSSLPRKLMFLSDDNVMLENYSALCSYGIPRNKIGRMYKEVRDIFGYNEG 181
           ESLGL   E  + LPRKLMFLSDD +M EN+ ALC+YGIPR KIGRMYKE R+IF Y  G
Sbjct: 135 ESLGLCPYEFETFLPRKLMFLSDDGIMFENFHALCNYGIPRGKIGRMYKEAREIFRYESG 194

Query: 182 VLALKLQGYEKLGLSAPTVIKLVSCSPSLLVSGVNEDFXXXXXXXXXXXXSSDWFVGHLS 361
           +LA+KL+GYE LGLS  TVIKLV+  P LLV G++ +F              DW   +LS
Sbjct: 195 MLAMKLRGYENLGLSKATVIKLVTSCPLLLVGGIDAEFSSVVDKLKGLQVGCDWLGRYLS 254

Query: 362 YESVYDWSKMHDMMCFLEKLGCSKKDIGRLFEINTAFLIENSG 490
               Y W ++ + + FL+K+GC ++ +  L +   A +IE SG
Sbjct: 255 DRKTYSWRRILETIEFLDKVGCKEEKLSSLLKTYPALVIEGSG 297


>ref|XP_002332130.1| predicted protein [Populus trichocarpa] gi|222875180|gb|EEF12311.1|
           predicted protein [Populus trichocarpa]
          Length = 577

 Score =  159 bits (402), Expect = 2e-37
 Identities = 80/163 (49%), Positives = 107/163 (65%)
 Frame = +2

Query: 2   ESLGLSQTELLSSLPRKLMFLSDDNVMLENYSALCSYGIPRNKIGRMYKEVRDIFGYNEG 181
           ESLGL  +E+ S LP  LM+L D++++LEN+  LC+YGIPR+KIGRMYKE  +IFGYN G
Sbjct: 135 ESLGLRPSEVPSVLPPHLMYLGDNDMLLENFHVLCNYGIPRSKIGRMYKEAIEIFGYNYG 194

Query: 182 VLALKLQGYEKLGLSAPTVIKLVSCSPSLLVSGVNEDFXXXXXXXXXXXXSSDWFVGHLS 361
           VL LKL  YE LGLS  TV+KLVSC PSLL+ GV+ +F             +D   G+LS
Sbjct: 195 VLKLKLLAYENLGLSKTTVVKLVSCCPSLLIGGVDREFVNVLGRLNRAGLKNDLIGGYLS 254

Query: 362 YESVYDWSKMHDMMCFLEKLGCSKKDIGRLFEINTAFLIENSG 490
            +  YDW ++ D + FL+K+G S++    L + N   + E SG
Sbjct: 255 AKESYDWKRLIDTIYFLDKVGYSEEQFRDLLKTNPVLVFEGSG 297