BLASTX nr result
ID: Coptis24_contig00028168
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00028168
(527 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinu... 315 3e-84
ref|XP_004140201.1| PREDICTED: uncharacterized protein LOC101207... 310 8e-83
ref|XP_002273996.2| PREDICTED: uncharacterized protein LOC100250... 309 1e-82
ref|XP_003551961.1| PREDICTED: uncharacterized protein LOC100791... 308 3e-82
ref|XP_002313993.1| predicted protein [Populus trichocarpa] gi|2... 308 3e-82
>ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223533605|gb|EEF35343.1| Ran GTPase binding protein,
putative [Ricinus communis]
Length = 1100
Score = 315 bits (807), Expect = 3e-84
Identities = 144/175 (82%), Positives = 161/175 (92%)
Frame = +1
Query: 1 ALLPKALRSTVVLDVQNIACGVRHAVLVTKQGEIFSWGEESGGRLGHGVEADVCQPKLID 180
+LLPKAL STVVLDVQNIACG RHA LVTKQGE+FSWGEESGGRLGHGV++DV PKLID
Sbjct: 292 SLLPKALESTVVLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVLHPKLID 351
Query: 181 TLTGMNVELVACGEYHTCAVTLSGDLYTWGDGIHNSGLLGHGTEVSHWIPKKISGYMEGL 360
+L+ +N+ELVACGEYHTCAVTLSGDLYTWGDG +N GLLGHG EVSHW+PK+++G +EG+
Sbjct: 352 SLSNINIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI 411
Query: 361 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRSGTSIPREVESLKGLRTV 525
HVSS+SCGPWHTAVVTS+GQLFTFGDGTFG LGHGDR SIPREVESLKGLRTV
Sbjct: 412 HVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTV 466
Score = 105 bits (262), Expect = 4e-21
Identities = 61/180 (33%), Positives = 91/180 (50%), Gaps = 12/180 (6%)
Frame = +1
Query: 7 LPKALRSTVVLDVQNIACGVRHAVLVTK------------QGEIFSWGEESGGRLGHGVE 150
+P+ + S L ACGV H V + G++F+WG+ GRLGHG +
Sbjct: 453 IPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK 512
Query: 151 ADVCQPKLIDTLTGMNVELVACGEYHTCAVTLSGDLYTWGDGIHNSGLLGHGTEVSHWIP 330
P + L N VACG T A+T SG +YT G ++ G LG+ + +P
Sbjct: 513 EAKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVY--GQLGN-PQADGKLP 569
Query: 331 KKISGYMEGLHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRSGTSIPREVESLK 510
++ G + V ++CG +H AV+TS +++T+G G G LGHGD + P VE+LK
Sbjct: 570 NRVEGRLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNFPSLVEALK 629
Score = 67.0 bits (162), Expect = 2e-09
Identities = 42/135 (31%), Positives = 68/135 (50%), Gaps = 1/135 (0%)
Frame = +1
Query: 4 LLPKALRSTVVLDVQNIACGVRHAVLVTKQGEIFSWGEESGGRLGHGVEADVCQPKLID- 180
L+P + + V + +ACG V +T G +++ G G+LG+ +AD P ++
Sbjct: 516 LVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEG 574
Query: 181 TLTGMNVELVACGEYHTCAVTLSGDLYTWGDGIHNSGLLGHGTEVSHWIPKKISGYMEGL 360
L+ VE +ACG YH +T ++YTWG G +G LGHG P + ++
Sbjct: 575 RLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGA--NGRLGHGDTDDRNFPSLVEA-LKDK 631
Query: 361 HVSSVSCGPWHTAVV 405
V S++CG TA +
Sbjct: 632 QVKSIACGTNFTAAI 646
Score = 64.7 bits (156), Expect = 8e-09
Identities = 31/82 (37%), Positives = 46/82 (56%)
Frame = +1
Query: 43 VQNIACGVRHAVLVTKQGEIFSWGEESGGRLGHGVEADVCQPKLIDTLTGMNVELVACGE 222
V+ IACG H ++T + E+++WG+ + GRLGHG D P L++ L V+ +ACG
Sbjct: 581 VEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIACGT 640
Query: 223 YHTCAVTLSGDLYTWGDGIHNS 288
T A+ L+ W GI S
Sbjct: 641 NFTAAIC----LHKWVSGIDQS 658
>ref|XP_004140201.1| PREDICTED: uncharacterized protein LOC101207486 [Cucumis sativus]
gi|449480975|ref|XP_004156044.1| PREDICTED:
uncharacterized LOC101207486 [Cucumis sativus]
Length = 1104
Score = 310 bits (794), Expect = 8e-83
Identities = 143/175 (81%), Positives = 158/175 (90%)
Frame = +1
Query: 1 ALLPKALRSTVVLDVQNIACGVRHAVLVTKQGEIFSWGEESGGRLGHGVEADVCQPKLID 180
+LLPKAL S VVLDVQNIACG RHA LVTKQGEIF+WGEESGGRLGHGV++DV QPKL+D
Sbjct: 296 SLLPKALESAVVLDVQNIACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDVLQPKLVD 355
Query: 181 TLTGMNVELVACGEYHTCAVTLSGDLYTWGDGIHNSGLLGHGTEVSHWIPKKISGYMEGL 360
L N+ELV+CGEYHTCAVTLSGDLYTWGDG +N GLLGHG EVSHWIPKKI+G +EG+
Sbjct: 356 ALGNTNIELVSCGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIPKKINGPLEGI 415
Query: 361 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRSGTSIPREVESLKGLRTV 525
HVSS++CGPWHTAVVTSAGQLFTFGDGTFG LGHGDR ++PREVESLKGLRTV
Sbjct: 416 HVSSIACGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRGSVTMPREVESLKGLRTV 470
Score = 104 bits (260), Expect = 7e-21
Identities = 66/232 (28%), Positives = 102/232 (43%), Gaps = 64/232 (27%)
Frame = +1
Query: 7 LPKALRSTVV-LDVQNIACGVRHAVLVTKQGEIFSWGEESGGRLGHGVEADVCQPKLIDT 183
+PK + + + V +IACG H +VT G++F++G+ + G LGHG V P+ +++
Sbjct: 404 IPKKINGPLEGIHVSSIACGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRGSVTMPREVES 463
Query: 184 LTGMNVELVACGEYHTCAVT------------LSGDLYTWGDGIHNSGLLGHGTEVSHWI 327
L G+ ACG +HT AV SG L+TWGDG + G LGHG + + +
Sbjct: 464 LKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG--DKGRLGHGDKETKLV 521
Query: 328 PK---------------------------------------------------KISGYME 354
P ++ G +
Sbjct: 522 PTCVAALVDPNFCRVSCGHSMTVALTTSGHVYTMGSPVYGQLGNPHADGKVPVRVEGKLS 581
Query: 355 GLHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRSGTSIPREVESLK 510
V ++CG +H AV+TS +++T+G G G LGHGD + P VE+LK
Sbjct: 582 KSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALK 633
Score = 63.9 bits (154), Expect = 1e-08
Identities = 30/82 (36%), Positives = 45/82 (54%)
Frame = +1
Query: 43 VQNIACGVRHAVLVTKQGEIFSWGEESGGRLGHGVEADVCQPKLIDTLTGMNVELVACGE 222
V+ IACG H ++T + E+++WG+ + GRLGHG D P L++ L V+ +ACG
Sbjct: 585 VEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVKSIACGT 644
Query: 223 YHTCAVTLSGDLYTWGDGIHNS 288
T A+ L+ W G S
Sbjct: 645 NFTAAIC----LHKWVSGFDQS 662
Score = 62.8 bits (151), Expect = 3e-08
Identities = 38/134 (28%), Positives = 64/134 (47%)
Frame = +1
Query: 4 LLPKALRSTVVLDVQNIACGVRHAVLVTKQGEIFSWGEESGGRLGHGVEADVCQPKLIDT 183
L+P + + V + ++CG V +T G +++ G G+LG+ ++
Sbjct: 520 LVPTCVAALVDPNFCRVSCGHSMTVALTTSGHVYTMGSPVYGQLGNPHADGKVPVRVEGK 579
Query: 184 LTGMNVELVACGEYHTCAVTLSGDLYTWGDGIHNSGLLGHGTEVSHWIPKKISGYMEGLH 363
L+ VE +ACG YH +T ++YTWG G +G LGHG P + ++
Sbjct: 580 LSKSFVEEIACGAYHVAVLTSRTEVYTWGKGA--NGRLGHGDTDDRNSPTLVEA-LKDKQ 636
Query: 364 VSSVSCGPWHTAVV 405
V S++CG TA +
Sbjct: 637 VKSIACGTNFTAAI 650
>ref|XP_002273996.2| PREDICTED: uncharacterized protein LOC100250008 [Vitis vinifera]
Length = 1047
Score = 309 bits (792), Expect = 1e-82
Identities = 144/175 (82%), Positives = 157/175 (89%)
Frame = +1
Query: 1 ALLPKALRSTVVLDVQNIACGVRHAVLVTKQGEIFSWGEESGGRLGHGVEADVCQPKLID 180
ALLPKAL STVVLDV +IACG +HAVLVTK+GE+FSWGEE G RLGHGVE DV PKLID
Sbjct: 280 ALLPKALESTVVLDVHSIACGGKHAVLVTKKGEVFSWGEECGSRLGHGVEVDVSHPKLID 339
Query: 181 TLTGMNVELVACGEYHTCAVTLSGDLYTWGDGIHNSGLLGHGTEVSHWIPKKISGYMEGL 360
L GMN+ELVACGEYH+CAVTLSGDLYTWGDG HNSGLLGHG+E SHWIPKK+SG MEG+
Sbjct: 340 ALCGMNIELVACGEYHSCAVTLSGDLYTWGDGTHNSGLLGHGSEASHWIPKKVSGPMEGM 399
Query: 361 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRSGTSIPREVESLKGLRTV 525
HVS V+CGPWHTAVVTSAGQLFTFGDGTFGALGHGD S SIPREVE+L+G RT+
Sbjct: 400 HVSYVACGPWHTAVVTSAGQLFTFGDGTFGALGHGDHSSMSIPREVEALRGQRTM 454
Score = 101 bits (252), Expect = 6e-20
Identities = 64/224 (28%), Positives = 97/224 (43%), Gaps = 66/224 (29%)
Frame = +1
Query: 37 LDVQNIACGVRHAVLVTKQGEIFSWGEESGGRLGHGVEADVCQPKLIDTLTGMNVELVAC 216
+ V +ACG H +VT G++F++G+ + G LGHG + + P+ ++ L G VAC
Sbjct: 399 MHVSYVACGPWHTAVVTSAGQLFTFGDGTFGALGHGDHSSMSIPREVEALRGQRTMRVAC 458
Query: 217 GEYHTCAV---------------TLSGDLYTWGDGIHNSGLLGHGTEVSHWIPKKIS--- 342
G +HT AV + SG L+TWGDG + G LGHG + +P+ ++
Sbjct: 459 GVWHTAAVVELMIASSSFESSGSSSSGKLFTWGDG--DKGRLGHGDKEPRLVPQSVTALI 516
Query: 343 ------------------------------------------------GYMEGLHVSSVS 378
G + V V+
Sbjct: 517 NESFCQVACGHNLSVALTTSGRVYTMGSAVYGQLGSPVADGKIPTLVEGKIANSFVEEVA 576
Query: 379 CGPWHTAVVTSAGQLFTFGDGTFGALGHGDRSGTSIPREVESLK 510
CG +H AV+TS +++T+G GT G LGHGD + P V+ LK
Sbjct: 577 CGSYHVAVLTSKTEVYTWGKGTNGQLGHGDNDHRNTPTLVDFLK 620
Score = 68.2 bits (165), Expect = 7e-10
Identities = 43/136 (31%), Positives = 71/136 (52%), Gaps = 1/136 (0%)
Frame = +1
Query: 4 LLPKALRSTVVLDVQNIACGVRHAVLVTKQGEIFSWGEESGGRLGHGVEADVCQPKLID- 180
L+P+++ + + +ACG +V +T G +++ G G+LG V AD P L++
Sbjct: 507 LVPQSVTALINESFCQVACGHNLSVALTTSGRVYTMGSAVYGQLGSPV-ADGKIPTLVEG 565
Query: 181 TLTGMNVELVACGEYHTCAVTLSGDLYTWGDGIHNSGLLGHGTEVSHWIPKKISGYMEGL 360
+ VE VACG YH +T ++YTWG G +G LGHG + H + +++
Sbjct: 566 KIANSFVEEVACGSYHVAVLTSKTEVYTWGKG--TNGQLGHG-DNDHRNTPTLVDFLKDK 622
Query: 361 HVSSVSCGPWHTAVVT 408
V +V CG TA ++
Sbjct: 623 QVKNVVCGLNFTAAIS 638
Score = 56.6 bits (135), Expect = 2e-06
Identities = 25/68 (36%), Positives = 40/68 (58%)
Frame = +1
Query: 43 VQNIACGVRHAVLVTKQGEIFSWGEESGGRLGHGVEADVCQPKLIDTLTGMNVELVACGE 222
V+ +ACG H ++T + E+++WG+ + G+LGHG P L+D L V+ V CG
Sbjct: 572 VEEVACGSYHVAVLTSKTEVYTWGKGTNGQLGHGDNDHRNTPTLVDFLKDKQVKNVVCGL 631
Query: 223 YHTCAVTL 246
T A++L
Sbjct: 632 NFTAAISL 639
>ref|XP_003551961.1| PREDICTED: uncharacterized protein LOC100791947 [Glycine max]
Length = 1106
Score = 308 bits (789), Expect = 3e-82
Identities = 139/175 (79%), Positives = 160/175 (91%)
Frame = +1
Query: 1 ALLPKALRSTVVLDVQNIACGVRHAVLVTKQGEIFSWGEESGGRLGHGVEADVCQPKLID 180
+LLPKAL S VVLDVQNIACG +HA LVTKQGE+FSWGEESGGRLGHGV++DV PKLI+
Sbjct: 300 SLLPKALESAVVLDVQNIACGGKHAALVTKQGEVFSWGEESGGRLGHGVDSDVPHPKLIE 359
Query: 181 TLTGMNVELVACGEYHTCAVTLSGDLYTWGDGIHNSGLLGHGTEVSHWIPKKISGYMEGL 360
+L+ N+ELVACGEYHTCAVTLSGDLYTWGDG +N GLLGHG +VSHW+PK+++G +EG+
Sbjct: 360 SLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGI 419
Query: 361 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRSGTSIPREVESLKGLRTV 525
HVSS+SCGPWHTAVVTS+GQLFTFGDGTFGALGHGDR S+PRE+ESLKGLRTV
Sbjct: 420 HVSSISCGPWHTAVVTSSGQLFTFGDGTFGALGHGDRKSVSLPREIESLKGLRTV 474
Score = 107 bits (268), Expect = 8e-22
Identities = 64/180 (35%), Positives = 95/180 (52%), Gaps = 12/180 (6%)
Frame = +1
Query: 7 LPKALRSTVVLDVQNIACGVRHAVLVTK------------QGEIFSWGEESGGRLGHGVE 150
LP+ + S L ACGV H V + G++F+WG+ GRLGHG +
Sbjct: 461 LPREIESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK 520
Query: 151 ADVCQPKLIDTLTGMNVELVACGEYHTCAVTLSGDLYTWGDGIHNSGLLGHGTEVSHWIP 330
P + TL N + VACG T A++ SG +YT G ++ G LG+ T+ +P
Sbjct: 521 ESKLVPTCVVTLVEPNCQ-VACGHSMTVALSRSGHVYTMGSCVY--GQLGN-TQADGKLP 576
Query: 331 KKISGYMEGLHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRSGTSIPREVESLK 510
++ G + V ++CG +H AV+TS ++FT+G G G LGHGD + + P VE+LK
Sbjct: 577 IRVEGKLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANGRLGHGDTNDRNTPTLVEALK 636
Score = 65.9 bits (159), Expect = 4e-09
Identities = 31/82 (37%), Positives = 46/82 (56%)
Frame = +1
Query: 43 VQNIACGVRHAVLVTKQGEIFSWGEESGGRLGHGVEADVCQPKLIDTLTGMNVELVACGE 222
V+ IACG H ++T + E+F+WG+ + GRLGHG D P L++ L V+ +ACG
Sbjct: 588 VEEIACGAYHVAVLTSRTEVFTWGKGANGRLGHGDTNDRNTPTLVEALKDKQVKSIACGT 647
Query: 223 YHTCAVTLSGDLYTWGDGIHNS 288
T A+ L+ W G+ S
Sbjct: 648 NFTAAIC----LHKWVSGVDQS 665
>ref|XP_002313993.1| predicted protein [Populus trichocarpa] gi|222850401|gb|EEE87948.1|
predicted protein [Populus trichocarpa]
Length = 1104
Score = 308 bits (789), Expect = 3e-82
Identities = 141/175 (80%), Positives = 157/175 (89%)
Frame = +1
Query: 1 ALLPKALRSTVVLDVQNIACGVRHAVLVTKQGEIFSWGEESGGRLGHGVEADVCQPKLID 180
+L PKAL S VVLDVQNIACG +HA LVTKQGEIFSWGEESGGRLGHGV++DV PKLID
Sbjct: 298 SLFPKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVMHPKLID 357
Query: 181 TLTGMNVELVACGEYHTCAVTLSGDLYTWGDGIHNSGLLGHGTEVSHWIPKKISGYMEGL 360
L+ N+ELVACGEYHTCAVTLSGDLYTWGDG +N GLLGHG EVSHW+PK+++G +EG+
Sbjct: 358 ALSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI 417
Query: 361 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRSGTSIPREVESLKGLRTV 525
HVSS+SCGPWHTAVVTSAGQLFTFGDGTFG LGHGDR S+P+EVESLKGLRTV
Sbjct: 418 HVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSISLPKEVESLKGLRTV 472
Score = 102 bits (255), Expect = 3e-20
Identities = 63/180 (35%), Positives = 89/180 (49%), Gaps = 12/180 (6%)
Frame = +1
Query: 7 LPKALRSTVVLDVQNIACGVRHAVLVTK------------QGEIFSWGEESGGRLGHGVE 150
LPK + S L ACGV H V + G++F+WG+ GRLGHG +
Sbjct: 459 LPKEVESLKGLRTVQAACGVWHTAAVIEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK 518
Query: 151 ADVCQPKLIDTLTGMNVELVACGEYHTCAVTLSGDLYTWGDGIHNSGLLGHGTEVSHWIP 330
P + L N VACG T A T SG +YT G ++ G LG+ +P
Sbjct: 519 EAKLVPTCVAALVEPNFCQVACGHSLTVARTTSGHVYTMGSPVY--GQLGNPLADGK-LP 575
Query: 331 KKISGYMEGLHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRSGTSIPREVESLK 510
++ G + V ++CG +H AV+TS +++T+G G G LGHGD + P VE+LK
Sbjct: 576 TRVEGKLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALK 635
Score = 65.5 bits (158), Expect = 5e-09
Identities = 39/134 (29%), Positives = 64/134 (47%)
Frame = +1
Query: 4 LLPKALRSTVVLDVQNIACGVRHAVLVTKQGEIFSWGEESGGRLGHGVEADVCQPKLIDT 183
L+P + + V + +ACG V T G +++ G G+LG+ + ++
Sbjct: 522 LVPTCVAALVEPNFCQVACGHSLTVARTTSGHVYTMGSPVYGQLGNPLADGKLPTRVEGK 581
Query: 184 LTGMNVELVACGEYHTCAVTLSGDLYTWGDGIHNSGLLGHGTEVSHWIPKKISGYMEGLH 363
L+ VE +ACG YH +T ++YTWG G +G LGHG P + ++
Sbjct: 582 LSKSFVEEIACGAYHVAVLTSKTEVYTWGKGA--NGRLGHGDTDDRNSPSLVEA-LKDKQ 638
Query: 364 VSSVSCGPWHTAVV 405
V S++CG TA +
Sbjct: 639 VKSIACGTSFTAAI 652
Score = 65.5 bits (158), Expect = 5e-09
Identities = 30/82 (36%), Positives = 46/82 (56%)
Frame = +1
Query: 43 VQNIACGVRHAVLVTKQGEIFSWGEESGGRLGHGVEADVCQPKLIDTLTGMNVELVACGE 222
V+ IACG H ++T + E+++WG+ + GRLGHG D P L++ L V+ +ACG
Sbjct: 587 VEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGT 646
Query: 223 YHTCAVTLSGDLYTWGDGIHNS 288
T A+ L+ W G+ S
Sbjct: 647 SFTAAIC----LHKWVSGVDQS 664