BLASTX nr result

ID: Coptis24_contig00028094 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028094
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526642.1| Spotted leaf protein, putative [Ricinus comm...   145   3e-33
ref|XP_002262704.2| PREDICTED: U-box domain-containing protein 2...   139   2e-31
emb|CAN66286.1| hypothetical protein VITISV_011184 [Vitis vinifera]   139   2e-31
ref|XP_003531998.1| PREDICTED: U-box domain-containing protein 2...   132   4e-29
ref|XP_003602626.1| U-box domain-containing protein [Medicago tr...   131   5e-29

>ref|XP_002526642.1| Spotted leaf protein, putative [Ricinus communis]
           gi|223534034|gb|EEF35754.1| Spotted leaf protein,
           putative [Ricinus communis]
          Length = 404

 Score =  145 bits (366), Expect = 3e-33
 Identities = 71/114 (62%), Positives = 87/114 (76%), Gaps = 3/114 (2%)
 Frame = +3

Query: 3   DPVTLCTGQTYDRSSIEKWLAGGNLTCPVTMQKLHDLSLVPNHTLQHLIHHWLCMDNRFN 182
           DPVTLCTGQTYDRSSIEKWLA GN TCPVTMQKLHDLS+VPNHTL+HLI+ WL M  +F+
Sbjct: 23  DPVTLCTGQTYDRSSIEKWLAAGNFTCPVTMQKLHDLSMVPNHTLRHLINEWLQMGPQFD 82

Query: 183 PEHSLPFNP---NHSLAVLKHNIESQDSTFTTKLETLGKIRIISEEVKGRRSYL 335
           P+H    +P   N SLA LKH+++S +ST   K ++L +I+ +SEE   R  YL
Sbjct: 83  PDHHHHHHPVTINDSLASLKHHLQSHESTLEKKFQSLQRIQALSEESTTRILYL 136


>ref|XP_002262704.2| PREDICTED: U-box domain-containing protein 26-like [Vitis vinifera]
          Length = 399

 Score =  139 bits (351), Expect = 2e-31
 Identities = 67/111 (60%), Positives = 82/111 (73%)
 Frame = +3

Query: 3   DPVTLCTGQTYDRSSIEKWLAGGNLTCPVTMQKLHDLSLVPNHTLQHLIHHWLCMDNRFN 182
           DPVTL TGQTYDRSSIE+WLA GNLTCPVTMQKLHD S+VPNHTL+HLI  WL    + +
Sbjct: 23  DPVTLSTGQTYDRSSIEQWLAAGNLTCPVTMQKLHDPSMVPNHTLRHLIDQWLQTGQQVD 82

Query: 183 PEHSLPFNPNHSLAVLKHNIESQDSTFTTKLETLGKIRIISEEVKGRRSYL 335
           PE      P  SLA +K +++SQ+S+   KLETL  IR+ S+E+  R SY+
Sbjct: 83  PESLTVMGPGPSLAAMKCSLQSQESSLENKLETLKAIRVSSDELSSRNSYM 133


>emb|CAN66286.1| hypothetical protein VITISV_011184 [Vitis vinifera]
          Length = 397

 Score =  139 bits (351), Expect = 2e-31
 Identities = 67/111 (60%), Positives = 82/111 (73%)
 Frame = +3

Query: 3   DPVTLCTGQTYDRSSIEKWLAGGNLTCPVTMQKLHDLSLVPNHTLQHLIHHWLCMDNRFN 182
           DPVTL TGQTYDRSSIE+WLA GNLTCPVTMQKLHD S+VPNHTL+HLI  WL    + +
Sbjct: 18  DPVTLSTGQTYDRSSIEQWLAAGNLTCPVTMQKLHDPSMVPNHTLRHLIDQWLQTGQQVD 77

Query: 183 PEHSLPFNPNHSLAVLKHNIESQDSTFTTKLETLGKIRIISEEVKGRRSYL 335
           PE      P  SLA +K +++SQ+S+   KLETL  IR+ S+E+  R SY+
Sbjct: 78  PESLTVMGPGPSLAAMKCSLQSQESSLENKLETLKAIRVSSDELSSRNSYM 128


>ref|XP_003531998.1| PREDICTED: U-box domain-containing protein 25-like [Glycine max]
          Length = 388

 Score =  132 bits (331), Expect = 4e-29
 Identities = 65/103 (63%), Positives = 80/103 (77%)
 Frame = +3

Query: 3   DPVTLCTGQTYDRSSIEKWLAGGNLTCPVTMQKLHDLSLVPNHTLQHLIHHWLCMDNRFN 182
           DPVTLCTGQTYDRS+IEKWLA GNLTCPVTMQKLHD S+VPNHTL+HLI  WL +D +F+
Sbjct: 23  DPVTLCTGQTYDRSNIEKWLAQGNLTCPVTMQKLHDPSIVPNHTLRHLIDQWLQLDPQFD 82

Query: 183 PEHSLPFNPNHSLAVLKHNIESQDSTFTTKLETLGKIRIISEE 311
           P +    +   SLA LK N+ES +S+   KL+ L KI ++S+E
Sbjct: 83  PANP-EASTIESLASLKLNLESYESSLENKLQALRKISVLSDE 124


>ref|XP_003602626.1| U-box domain-containing protein [Medicago truncatula]
           gi|355491674|gb|AES72877.1| U-box domain-containing
           protein [Medicago truncatula]
          Length = 404

 Score =  131 bits (330), Expect = 5e-29
 Identities = 64/103 (62%), Positives = 78/103 (75%)
 Frame = +3

Query: 3   DPVTLCTGQTYDRSSIEKWLAGGNLTCPVTMQKLHDLSLVPNHTLQHLIHHWLCMDNRFN 182
           DPVTL TGQTYDRSSIEKW++ GN TCPVTMQKLHDLS VPNHTL+HLI  WL +  +F 
Sbjct: 25  DPVTLTTGQTYDRSSIEKWISAGNFTCPVTMQKLHDLSFVPNHTLRHLIDQWLQLGAQFE 84

Query: 183 PEHSLPFNPNHSLAVLKHNIESQDSTFTTKLETLGKIRIISEE 311
           P  +     ++ LA LKH +ES DST  TKL++L KI ++S+E
Sbjct: 85  PSSNNSATIDY-LASLKHTLESHDSTLETKLKSLEKISVLSDE 126


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