BLASTX nr result

ID: Coptis24_contig00028064 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028064
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273131.2| PREDICTED: rab proteins geranylgeranyltransf...    55   5e-06
emb|CAN62777.1| hypothetical protein VITISV_019372 [Vitis vinifera]    55   5e-06

>ref|XP_002273131.2| PREDICTED: rab proteins geranylgeranyltransferase component A
           2-like [Vitis vinifera] gi|296088658|emb|CBI37649.3|
           unnamed protein product [Vitis vinifera]
          Length = 556

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/37 (67%), Positives = 32/37 (86%)
 Frame = -2

Query: 113 DDDVSYPSIEPSQFDLIVVGTGLPESVVAASSSANGK 3
           D+  SYP IEP+ FDLIVVGTGLP+SV+AA++S+ GK
Sbjct: 2   DETPSYPPIEPTDFDLIVVGTGLPQSVIAAAASSAGK 38


>emb|CAN62777.1| hypothetical protein VITISV_019372 [Vitis vinifera]
          Length = 812

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/37 (67%), Positives = 32/37 (86%)
 Frame = -2

Query: 113 DDDVSYPSIEPSQFDLIVVGTGLPESVVAASSSANGK 3
           D+  SYP IEP+ FDLIVVGTGLP+SV+AA++S+ GK
Sbjct: 2   DETPSYPPIEPTDFDLIVVGTGLPQSVIAAAASSAGK 38


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