BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028029
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004172796.1| PREDICTED: polygalacturonase At1g48100-like,...   129   3e-28
ref|XP_004142980.1| PREDICTED: polygalacturonase At1g48100-like ...   127   7e-28
ref|XP_002525361.1| polygalacturonase, putative [Ricinus communi...   119   3e-25
ref|XP_003532001.1| PREDICTED: polygalacturonase At1g48100 isofo...   117   1e-24
ref|XP_003532000.1| PREDICTED: polygalacturonase At1g48100 isofo...   117   1e-24

>ref|XP_004172796.1| PREDICTED: polygalacturonase At1g48100-like, partial [Cucumis
           sativus]
          Length = 159

 Score =  129 bits (323), Expect = 3e-28
 Identities = 58/77 (75%), Positives = 66/77 (85%)
 Frame = -3

Query: 271 TPPAKGDNGRNSAIFNVLKFGAKGDGNVDDTKAFETAWAAACKVKASTVLVPSDYVFLVG 92
           TPP KG +  +SAIFNVL FGAKG+G  DDTKAFE AWA ACKV+ STV+VP+DYVF VG
Sbjct: 75  TPPKKGPSAGDSAIFNVLDFGAKGNGETDDTKAFEDAWAEACKVEGSTVMVPADYVFFVG 134

Query: 91  PVSFSGPYCQPDIVFQV 41
           P+SFSGPYCQPDI+FQV
Sbjct: 135 PISFSGPYCQPDIIFQV 151


>ref|XP_004142980.1| PREDICTED: polygalacturonase At1g48100-like [Cucumis sativus]
          Length = 505

 Score =  127 bits (320), Expect = 7e-28
 Identities = 57/77 (74%), Positives = 66/77 (85%)
 Frame = -3

Query: 271 TPPAKGDNGRNSAIFNVLKFGAKGDGNVDDTKAFETAWAAACKVKASTVLVPSDYVFLVG 92
           TPP KG +  +SAIFNVL FGAKG+G  DDTKAFE AWA ACKV+ STV+VP+DYVF VG
Sbjct: 75  TPPKKGPSAGDSAIFNVLDFGAKGNGETDDTKAFEDAWAEACKVEGSTVMVPADYVFFVG 134

Query: 91  PVSFSGPYCQPDIVFQV 41
           P+SFSGPYCQPDI+FQ+
Sbjct: 135 PISFSGPYCQPDIIFQL 151


>ref|XP_002525361.1| polygalacturonase, putative [Ricinus communis]
           gi|223535324|gb|EEF36999.1| polygalacturonase, putative
           [Ricinus communis]
          Length = 519

 Score =  119 bits (298), Expect = 3e-25
 Identities = 54/76 (71%), Positives = 64/76 (84%)
 Frame = -3

Query: 268 PPAKGDNGRNSAIFNVLKFGAKGDGNVDDTKAFETAWAAACKVKASTVLVPSDYVFLVGP 89
           PP+     + SA FNVL FGAKGDG  DDTKAF+ AWAAACKV+AST+LVP++Y+FLVGP
Sbjct: 91  PPSSSSPIKGSATFNVLNFGAKGDGKTDDTKAFQAAWAAACKVEASTMLVPAEYIFLVGP 150

Query: 88  VSFSGPYCQPDIVFQV 41
           VSFSGPYCQ +IVFQ+
Sbjct: 151 VSFSGPYCQANIVFQL 166


>ref|XP_003532001.1| PREDICTED: polygalacturonase At1g48100 isoform 3 [Glycine max]
          Length = 506

 Score =  117 bits (293), Expect = 1e-24
 Identities = 55/80 (68%), Positives = 64/80 (80%), Gaps = 3/80 (3%)
 Frame = -3

Query: 271 TPPAKGDNGRN---SAIFNVLKFGAKGDGNVDDTKAFETAWAAACKVKASTVLVPSDYVF 101
           TPP KG NG     +  FNVL FGAKGDG  DDTKAF+ AWA ACKV++ST+LVP+DYVF
Sbjct: 105 TPPPKGYNGGGHSPTTTFNVLDFGAKGDGKSDDTKAFQEAWAEACKVESSTMLVPADYVF 164

Query: 100 LVGPVSFSGPYCQPDIVFQV 41
            VGP+SFSGPYC+P IVFQ+
Sbjct: 165 FVGPISFSGPYCKPSIVFQL 184


>ref|XP_003532000.1| PREDICTED: polygalacturonase At1g48100 isoform 2 [Glycine max]
          Length = 523

 Score =  117 bits (293), Expect = 1e-24
 Identities = 55/80 (68%), Positives = 64/80 (80%), Gaps = 3/80 (3%)
 Frame = -3

Query: 271 TPPAKGDNGRN---SAIFNVLKFGAKGDGNVDDTKAFETAWAAACKVKASTVLVPSDYVF 101
           TPP KG NG     +  FNVL FGAKGDG  DDTKAF+ AWA ACKV++ST+LVP+DYVF
Sbjct: 105 TPPPKGYNGGGHSPTTTFNVLDFGAKGDGKSDDTKAFQEAWAEACKVESSTMLVPADYVF 164

Query: 100 LVGPVSFSGPYCQPDIVFQV 41
            VGP+SFSGPYC+P IVFQ+
Sbjct: 165 FVGPISFSGPYCKPSIVFQL 184