BLASTX nr result

ID: Coptis24_contig00028028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028028
         (919 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34509.3| unnamed protein product [Vitis vinifera]              377   e-102
ref|XP_002265207.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] ...   377   e-102
ref|XP_002299456.1| predicted protein [Populus trichocarpa] gi|2...   370   e-100
ref|XP_002303661.1| predicted protein [Populus trichocarpa] gi|2...   370   e-100
ref|XP_002518849.1| 3-oxoacyl-[acyl-carrier-protein] synthase, p...   366   5e-99

>emb|CBI34509.3| unnamed protein product [Vitis vinifera]
          Length = 488

 Score =  377 bits (969), Expect = e-102
 Identities = 185/215 (86%), Positives = 196/215 (91%)
 Frame = -3

Query: 917 GVGGFIACRALSQRNDEPQRASRPWDKDRDGFVIGEGAGVLIMESLEHAMKRGANIIAEY 738
           GVGGFIACRALSQRN++PQ+ASRPWDKDRDGFV+GEG+GVLIMESLEHAMKRGANIIAEY
Sbjct: 274 GVGGFIACRALSQRNEDPQKASRPWDKDRDGFVMGEGSGVLIMESLEHAMKRGANIIAEY 333

Query: 737 LGGAVTCDAHHMTDPRKDGLGVSSCISKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNA 558
           LGGA+TCDAHHMTDPR DGLGVSSCI+KSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNA
Sbjct: 334 LGGAITCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNA 393

Query: 557 IKKVFKDTSELKMNGTKSMXXXXXXXXXXXXXXATIQAINTGWLHPTINQDNLESQVTID 378
           IKKVFKDTSE+KMNGTKSM              ATI+AI TGW+HPTINQ NLE  VTID
Sbjct: 394 IKKVFKDTSEIKMNGTKSMIGHGLGAAGGLEAIATIKAITTGWIHPTINQYNLEPDVTID 453

Query: 377 TVPNVKKKHEVHVGISNSFGFGGHNSVVVFAPFSP 273
           TVPNVKKKHEVHVGISNSFGFGGHNSVVVFAPF+P
Sbjct: 454 TVPNVKKKHEVHVGISNSFGFGGHNSVVVFAPFNP 488


>ref|XP_002265207.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase I,
           chloroplastic-like [Vitis vinifera]
          Length = 453

 Score =  377 bits (969), Expect = e-102
 Identities = 185/215 (86%), Positives = 196/215 (91%)
 Frame = -3

Query: 917 GVGGFIACRALSQRNDEPQRASRPWDKDRDGFVIGEGAGVLIMESLEHAMKRGANIIAEY 738
           GVGGFIACRALSQRN++PQ+ASRPWDKDRDGFV+GEG+GVLIMESLEHAMKRGANIIAEY
Sbjct: 239 GVGGFIACRALSQRNEDPQKASRPWDKDRDGFVMGEGSGVLIMESLEHAMKRGANIIAEY 298

Query: 737 LGGAVTCDAHHMTDPRKDGLGVSSCISKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNA 558
           LGGA+TCDAHHMTDPR DGLGVSSCI+KSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNA
Sbjct: 299 LGGAITCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNA 358

Query: 557 IKKVFKDTSELKMNGTKSMXXXXXXXXXXXXXXATIQAINTGWLHPTINQDNLESQVTID 378
           IKKVFKDTSE+KMNGTKSM              ATI+AI TGW+HPTINQ NLE  VTID
Sbjct: 359 IKKVFKDTSEIKMNGTKSMIGHGLGAAGGLEAIATIKAITTGWIHPTINQYNLEPDVTID 418

Query: 377 TVPNVKKKHEVHVGISNSFGFGGHNSVVVFAPFSP 273
           TVPNVKKKHEVHVGISNSFGFGGHNSVVVFAPF+P
Sbjct: 419 TVPNVKKKHEVHVGISNSFGFGGHNSVVVFAPFNP 453


>ref|XP_002299456.1| predicted protein [Populus trichocarpa] gi|222846714|gb|EEE84261.1|
           predicted protein [Populus trichocarpa]
          Length = 495

 Score =  370 bits (951), Expect = e-100
 Identities = 181/214 (84%), Positives = 197/214 (92%)
 Frame = -3

Query: 917 GVGGFIACRALSQRNDEPQRASRPWDKDRDGFVIGEGAGVLIMESLEHAMKRGANIIAEY 738
           GVGGFIACRALSQRN++P++ASRPWDKDRDGFV+GEG+GVLIMESL+HAMKRGANIIAEY
Sbjct: 281 GVGGFIACRALSQRNEDPKKASRPWDKDRDGFVMGEGSGVLIMESLDHAMKRGANIIAEY 340

Query: 737 LGGAVTCDAHHMTDPRKDGLGVSSCISKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNA 558
           LGGAVTCDAHHMTDPR DGLGVS+CI+KSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNA
Sbjct: 341 LGGAVTCDAHHMTDPRSDGLGVSTCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNA 400

Query: 557 IKKVFKDTSELKMNGTKSMXXXXXXXXXXXXXXATIQAINTGWLHPTINQDNLESQVTID 378
           IKKVFK+TSE+KMNGTKSM              ATI+AINTGWLHPTINQDN+E  VTID
Sbjct: 401 IKKVFKNTSEIKMNGTKSMIGHGLGAAGALEAIATIKAINTGWLHPTINQDNIELDVTID 460

Query: 377 TVPNVKKKHEVHVGISNSFGFGGHNSVVVFAPFS 276
           TVPNVKK+HEV+VGISNSFGFGGHNSVVVFAPF+
Sbjct: 461 TVPNVKKQHEVNVGISNSFGFGGHNSVVVFAPFT 494


>ref|XP_002303661.1| predicted protein [Populus trichocarpa] gi|222841093|gb|EEE78640.1|
           predicted protein [Populus trichocarpa]
          Length = 429

 Score =  370 bits (951), Expect = e-100
 Identities = 181/215 (84%), Positives = 196/215 (91%)
 Frame = -3

Query: 917 GVGGFIACRALSQRNDEPQRASRPWDKDRDGFVIGEGAGVLIMESLEHAMKRGANIIAEY 738
           GVGGFIACRALSQRN++P++ASRPWDKDRDGFV+GEG+GVLIMESLEHAMKRGANIIAEY
Sbjct: 215 GVGGFIACRALSQRNEDPKKASRPWDKDRDGFVMGEGSGVLIMESLEHAMKRGANIIAEY 274

Query: 737 LGGAVTCDAHHMTDPRKDGLGVSSCISKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNA 558
           LGGA TCDAHHMT+PR DGLGVS+CI+KSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNA
Sbjct: 275 LGGAATCDAHHMTNPRSDGLGVSTCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNA 334

Query: 557 IKKVFKDTSELKMNGTKSMXXXXXXXXXXXXXXATIQAINTGWLHPTINQDNLESQVTID 378
           IKKVFKDTSE+KMNGTKSM              ATI+AINTGWLHPTINQDN+E  VTID
Sbjct: 335 IKKVFKDTSEIKMNGTKSMIGHGLGAAGGLEAIATIKAINTGWLHPTINQDNIELDVTID 394

Query: 377 TVPNVKKKHEVHVGISNSFGFGGHNSVVVFAPFSP 273
           TVPNVKK+HEV+V ISNSFGFGGHNSVVVFAPF+P
Sbjct: 395 TVPNVKKQHEVNVAISNSFGFGGHNSVVVFAPFTP 429


>ref|XP_002518849.1| 3-oxoacyl-[acyl-carrier-protein] synthase, putative [Ricinus
           communis] gi|223541836|gb|EEF43382.1|
           3-oxoacyl-[acyl-carrier-protein] synthase, putative
           [Ricinus communis]
          Length = 485

 Score =  366 bits (939), Expect = 5e-99
 Identities = 181/213 (84%), Positives = 193/213 (90%)
 Frame = -3

Query: 917 GVGGFIACRALSQRNDEPQRASRPWDKDRDGFVIGEGAGVLIMESLEHAMKRGANIIAEY 738
           GVGGFIACRALSQRN++P+RASRPWDK+RDGFV+GEGAGVLIMESL+HAMKRGANIIAEY
Sbjct: 271 GVGGFIACRALSQRNEDPKRASRPWDKNRDGFVMGEGAGVLIMESLDHAMKRGANIIAEY 330

Query: 737 LGGAVTCDAHHMTDPRKDGLGVSSCISKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNA 558
           LGGAVTCDAHHMTDPR DGLGVS+CIS+SLEDA VSPEEVNYVNAHATSTLAGDLAEVNA
Sbjct: 331 LGGAVTCDAHHMTDPRSDGLGVSTCISRSLEDAKVSPEEVNYVNAHATSTLAGDLAEVNA 390

Query: 557 IKKVFKDTSELKMNGTKSMXXXXXXXXXXXXXXATIQAINTGWLHPTINQDNLESQVTID 378
           IKKVFKDTSE+KMNGTKSM              ATI+AI TGWLHPTINQDNLE  VTID
Sbjct: 391 IKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAIATIKAITTGWLHPTINQDNLEPDVTID 450

Query: 377 TVPNVKKKHEVHVGISNSFGFGGHNSVVVFAPF 279
           TVPNVKK+HEV+V ISNSFGFGGHNSVVVFAPF
Sbjct: 451 TVPNVKKQHEVNVAISNSFGFGGHNSVVVFAPF 483


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