BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028016
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527364.1| conserved hypothetical protein [Ricinus comm...    65   7e-09
ref|XP_002307329.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264...    63   2e-08
gb|ABN09044.1| Ribonuclease H [Medicago truncatula]                    63   3e-08
emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]    62   6e-08

>ref|XP_002527364.1| conserved hypothetical protein [Ricinus communis]
           gi|223533283|gb|EEF35036.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 437

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 33/89 (37%), Positives = 48/89 (53%)
 Frame = -3

Query: 319 WKKAIANMIMLNTDGMLQMHKAGYGGLFRDADGRVLLLYCGASKSKSILFLELQGIEVGL 140
           WKK     I LNTDG +    AG+GGL RD +G  +  +   +    I  +EL  I  GL
Sbjct: 274 WKKPDVGWIKLNTDGSVDRQHAGFGGLLRDNEGNAICAFVSKAPLDDIFLVELWAIWRGL 333

Query: 139 SIAVKMGYKHLMVNSDSVRAVNIVNGTET 53
            +A+ +G K + V SDS+ AV  +N  ++
Sbjct: 334 VLALGLGIKVIWVESDSMSAVKTINRVQS 362


>ref|XP_002307329.1| predicted protein [Populus trichocarpa] gi|222856778|gb|EEE94325.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 34/97 (35%), Positives = 50/97 (51%)
 Frame = -3

Query: 355 LNSMRKEQKLVQWKKAIANMIMLNTDGMLQMHKAGYGGLFRDADGRVLLLYCGASKSKSI 176
           L  + +  +  QWK+     I LNTDG +    AG GGLFRD +G  +  +   +    I
Sbjct: 155 LGPVARSIRWCQWKRPDFGWIKLNTDGSIDSENAGIGGLFRDYEGNAICGFVSKASGHDI 214

Query: 175 LFLELQGIEVGLSIAVKMGYKHLMVNSDSVRAVNIVN 65
             +EL  I  GL +A+ +  + L V SDS+  VN +N
Sbjct: 215 FLVELWAIWRGLVLALNLHIQVLWVESDSLSVVNTIN 251


>ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264337 [Vitis vinifera]
          Length = 431

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/97 (35%), Positives = 49/97 (50%)
 Frame = -3

Query: 355 LNSMRKEQKLVQWKKAIANMIMLNTDGMLQMHKAGYGGLFRDADGRVLLLYCGASKSKSI 176
           L  + +  +   W+K       LNTDG +    AG+GGLFRD +G  +  Y   +    I
Sbjct: 256 LTPVARSIRWYSWEKPEFGWTKLNTDGSIDRGNAGFGGLFRDHNGDPICAYASKAHQNDI 315

Query: 175 LFLELQGIEVGLSIAVKMGYKHLMVNSDSVRAVNIVN 65
             +EL  I  GL +A  +G K + V SDS+ AV  +N
Sbjct: 316 FLVELWAIWRGLVLASGLGIKAIWVESDSMSAVKTIN 352


>gb|ABN09044.1| Ribonuclease H [Medicago truncatula]
          Length = 235

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/115 (30%), Positives = 60/115 (52%), Gaps = 2/115 (1%)
 Frame = -3

Query: 352 NSMRKEQKLVQWKKAIANMIMLNTDG--MLQMHKAGYGGLFRDADGRVLLLYCGASKSKS 179
           +S+++  ++V W++   N + LN DG   L  +   +GGL RD     L  + G +    
Sbjct: 59  HSVQQPARIVSWQRPSMNSVALNVDGNVFLDSNLGSFGGLIRDHTSSFLHGFFGKNSRPC 118

Query: 178 ILFLELQGIEVGLSIAVKMGYKHLMVNSDSVRAVNIVNGTETPP*HYLNLLQAVK 14
           IL +E+ G+  GL +   +G KH++ +SDS   V++V         Y NL+ A+K
Sbjct: 119 ILHVEISGLYHGLKLCWDIGIKHVVCHSDSTTVVDLVQKDLNVHHKYGNLIMAIK 173


>emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]
          Length = 318

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 33/97 (34%), Positives = 48/97 (49%)
 Frame = -3

Query: 355 LNSMRKEQKLVQWKKAIANMIMLNTDGMLQMHKAGYGGLFRDADGRVLLLYCGASKSKSI 176
           L  + +  +   W+K       LNTDG +    AG+GGLFRD +G  +  Y   +    I
Sbjct: 143 LTPVARSIRWYSWEKPEFGWTKLNTDGSIDRGNAGFGGLFRDHNGDPICAYASKAHQNDI 202

Query: 175 LFLELQGIEVGLSIAVKMGYKHLMVNSDSVRAVNIVN 65
             +EL  I  GL +A  +G K + V SDS+  V  +N
Sbjct: 203 FLVELWAIWRGLVLASGLGIKAIWVESDSMSVVKTIN 239