BLASTX nr result

ID: Coptis24_contig00027949 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027949
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265371.1| PREDICTED: acyl-CoA synthetase family member...    58   9e-07
emb|CAN80284.1| hypothetical protein VITISV_035380 [Vitis vinifera]    58   9e-07
ref|XP_002870455.1| hypothetical protein ARALYDRAFT_330218 [Arab...    56   3e-06

>ref|XP_002265371.1| PREDICTED: acyl-CoA synthetase family member 4 [Vitis vinifera]
            gi|296088768|emb|CBI38218.3| unnamed protein product
            [Vitis vinifera]
          Length = 1175

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 42/126 (33%), Positives = 61/126 (48%), Gaps = 5/126 (3%)
 Frame = -1

Query: 365  YSSPYKLLNAILDHELEHTFQLGSKFDWDVDLEAQNGNKLVRSSLGIHSGSI----DESP 198
            + SP KL  A+L  E   +  +G   D    L++   +       G  S  +    D+ P
Sbjct: 685  FPSPSKLQVALLKKEGSSSIDVG--IDDIGSLKSDTCDLYSSKPCGTSSKPVFENNDKYP 742

Query: 197  V-SKCLKVEKNTYPSSSITPLREEVPWVSRLNLLTSCSFSRCNKVFYEGKYDGNDVCQAC 21
            V SKCLKV+ NTY +S      +  PW S  ++   CSFSRCNKV  E +    ++C   
Sbjct: 743  VTSKCLKVDSNTYATSKSVIPCDGCPWNSN-SVPMLCSFSRCNKVMCEVESKMKNICHTT 801

Query: 20   WSAQYP 3
            WS ++P
Sbjct: 802  WSIEFP 807


>emb|CAN80284.1| hypothetical protein VITISV_035380 [Vitis vinifera]
          Length = 1228

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 42/126 (33%), Positives = 61/126 (48%), Gaps = 5/126 (3%)
 Frame = -1

Query: 365  YSSPYKLLNAILDHELEHTFQLGSKFDWDVDLEAQNGNKLVRSSLGIHSGSI----DESP 198
            + SP KL  A+L  E   +  +G   D    L++   +       G  S  +    D+ P
Sbjct: 1022 FPSPSKLQVALLKKEGSSSIDVG--IDDIGSLKSDTCDLYSSKPCGTSSKPVFENNDKYP 1079

Query: 197  V-SKCLKVEKNTYPSSSITPLREEVPWVSRLNLLTSCSFSRCNKVFYEGKYDGNDVCQAC 21
            V SKCLKV+ NTY +S      +  PW S  ++   CSFSRCNKV  E +    ++C   
Sbjct: 1080 VTSKCLKVDSNTYATSKSVIPCDGCPWNSN-SVPMLCSFSRCNKVMCEVESKMKNICHTT 1138

Query: 20   WSAQYP 3
            WS ++P
Sbjct: 1139 WSIEFP 1144


>ref|XP_002870455.1| hypothetical protein ARALYDRAFT_330218 [Arabidopsis lyrata subsp.
            lyrata] gi|297316291|gb|EFH46714.1| hypothetical protein
            ARALYDRAFT_330218 [Arabidopsis lyrata subsp. lyrata]
          Length = 1120

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 41/130 (31%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
 Frame = -1

Query: 365  YSSPYKLLNAILDHE--LEHTFQLGSKFDWDVDLEAQNGNKLVRSSLGIHSGSIDESPVS 192
            + SP +LL  + + E  L    Q  +    D   E+QNGN LV  ++  HSG +  SP  
Sbjct: 631  FRSPSRLLICLSEKEGKLREDTQHNTTQKLDHKTESQNGNGLVSRTVPRHSG-VTSSPTP 689

Query: 191  KCLKVEKNTYP------SSSITP-LREEVPWVSRLNLLTSCSFSRCNKVFYEGKYDGNDV 33
              ++ EKN  P      S   +P ++E+  W S  +  T C+FSRCNKV+        + 
Sbjct: 690  SGMQCEKNNSPKRLKIDSKIFSPKMKEKKSWDSGFSQ-TQCAFSRCNKVYSPNSCSNEEA 748

Query: 32   CQACWSAQYP 3
             +  WS + P
Sbjct: 749  NRENWSVEIP 758


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