BLASTX nr result
ID: Coptis24_contig00027949
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00027949 (368 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002265371.1| PREDICTED: acyl-CoA synthetase family member... 58 9e-07 emb|CAN80284.1| hypothetical protein VITISV_035380 [Vitis vinifera] 58 9e-07 ref|XP_002870455.1| hypothetical protein ARALYDRAFT_330218 [Arab... 56 3e-06 >ref|XP_002265371.1| PREDICTED: acyl-CoA synthetase family member 4 [Vitis vinifera] gi|296088768|emb|CBI38218.3| unnamed protein product [Vitis vinifera] Length = 1175 Score = 57.8 bits (138), Expect = 9e-07 Identities = 42/126 (33%), Positives = 61/126 (48%), Gaps = 5/126 (3%) Frame = -1 Query: 365 YSSPYKLLNAILDHELEHTFQLGSKFDWDVDLEAQNGNKLVRSSLGIHSGSI----DESP 198 + SP KL A+L E + +G D L++ + G S + D+ P Sbjct: 685 FPSPSKLQVALLKKEGSSSIDVG--IDDIGSLKSDTCDLYSSKPCGTSSKPVFENNDKYP 742 Query: 197 V-SKCLKVEKNTYPSSSITPLREEVPWVSRLNLLTSCSFSRCNKVFYEGKYDGNDVCQAC 21 V SKCLKV+ NTY +S + PW S ++ CSFSRCNKV E + ++C Sbjct: 743 VTSKCLKVDSNTYATSKSVIPCDGCPWNSN-SVPMLCSFSRCNKVMCEVESKMKNICHTT 801 Query: 20 WSAQYP 3 WS ++P Sbjct: 802 WSIEFP 807 >emb|CAN80284.1| hypothetical protein VITISV_035380 [Vitis vinifera] Length = 1228 Score = 57.8 bits (138), Expect = 9e-07 Identities = 42/126 (33%), Positives = 61/126 (48%), Gaps = 5/126 (3%) Frame = -1 Query: 365 YSSPYKLLNAILDHELEHTFQLGSKFDWDVDLEAQNGNKLVRSSLGIHSGSI----DESP 198 + SP KL A+L E + +G D L++ + G S + D+ P Sbjct: 1022 FPSPSKLQVALLKKEGSSSIDVG--IDDIGSLKSDTCDLYSSKPCGTSSKPVFENNDKYP 1079 Query: 197 V-SKCLKVEKNTYPSSSITPLREEVPWVSRLNLLTSCSFSRCNKVFYEGKYDGNDVCQAC 21 V SKCLKV+ NTY +S + PW S ++ CSFSRCNKV E + ++C Sbjct: 1080 VTSKCLKVDSNTYATSKSVIPCDGCPWNSN-SVPMLCSFSRCNKVMCEVESKMKNICHTT 1138 Query: 20 WSAQYP 3 WS ++P Sbjct: 1139 WSIEFP 1144 >ref|XP_002870455.1| hypothetical protein ARALYDRAFT_330218 [Arabidopsis lyrata subsp. lyrata] gi|297316291|gb|EFH46714.1| hypothetical protein ARALYDRAFT_330218 [Arabidopsis lyrata subsp. lyrata] Length = 1120 Score = 55.8 bits (133), Expect = 3e-06 Identities = 41/130 (31%), Positives = 62/130 (47%), Gaps = 9/130 (6%) Frame = -1 Query: 365 YSSPYKLLNAILDHE--LEHTFQLGSKFDWDVDLEAQNGNKLVRSSLGIHSGSIDESPVS 192 + SP +LL + + E L Q + D E+QNGN LV ++ HSG + SP Sbjct: 631 FRSPSRLLICLSEKEGKLREDTQHNTTQKLDHKTESQNGNGLVSRTVPRHSG-VTSSPTP 689 Query: 191 KCLKVEKNTYP------SSSITP-LREEVPWVSRLNLLTSCSFSRCNKVFYEGKYDGNDV 33 ++ EKN P S +P ++E+ W S + T C+FSRCNKV+ + Sbjct: 690 SGMQCEKNNSPKRLKIDSKIFSPKMKEKKSWDSGFSQ-TQCAFSRCNKVYSPNSCSNEEA 748 Query: 32 CQACWSAQYP 3 + WS + P Sbjct: 749 NRENWSVEIP 758