BLASTX nr result

ID: Coptis24_contig00027897 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027897
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73240.1| hypothetical protein VITISV_035336 [Vitis vinifera]   119   3e-25
emb|CAN69431.1| hypothetical protein VITISV_024659 [Vitis vinifera]   119   3e-25
emb|CAN81130.1| hypothetical protein VITISV_003944 [Vitis vinifera]   118   4e-25
emb|CAN71109.1| hypothetical protein VITISV_001479 [Vitis vinifera]   118   4e-25
emb|CAN61548.1| hypothetical protein VITISV_043524 [Vitis vinifera]   118   4e-25

>emb|CAN73240.1| hypothetical protein VITISV_035336 [Vitis vinifera]
          Length = 1244

 Score =  119 bits (297), Expect = 3e-25
 Identities = 60/115 (52%), Positives = 76/115 (66%), Gaps = 1/115 (0%)
 Frame = +2

Query: 2   NYTKGDLGTVFLGDDQPCDIVSKGDMHIKM-NGSSWLLRNVKYIPDLRKNLISVGQLASE 178
           NY  GD G V+L D    D+V  GD+ I + NGS WLL  V++IPDLR+NLISVGQL  E
Sbjct: 305 NYVAGDFGKVYLADGSALDVVGLGDVRISLPNGSXWLLEKVRHIPDLRRNLISVGQLDDE 364

Query: 179 EFVTVFTDNT*KVSKGSMVVANGKKDGTLYMTTHGCESIVVAHGKEDPNVWHRRL 343
               +F   T KV+KG+ V+A GKK GTLYMT+   ++I VA    D ++WHRRL
Sbjct: 365 GHAILFVGGTWKVTKGARVLARGKKTGTLYMTSCPRDTIAVADASTDTSLWHRRL 419


>emb|CAN69431.1| hypothetical protein VITISV_024659 [Vitis vinifera]
          Length = 1287

 Score =  119 bits (297), Expect = 3e-25
 Identities = 60/115 (52%), Positives = 77/115 (66%), Gaps = 1/115 (0%)
 Frame = +2

Query: 2   NYTKGDLGTVFLGDDQPCDIVSKGDMHIKM-NGSSWLLRNVKYIPDLRKNLISVGQLASE 178
           NY  GD G V+L D    D+V  GD+ I + NGS WLL  V++IPDLR+NLISVGQL  E
Sbjct: 305 NYVAGDFGKVYLADGSALDVVGLGDVRISLPNGSVWLLEKVRHIPDLRRNLISVGQLDDE 364

Query: 179 EFVTVFTDNT*KVSKGSMVVANGKKDGTLYMTTHGCESIVVAHGKEDPNVWHRRL 343
               +F   T KV+KG+ V+A+GKK GTLYMT+   ++I VA    D ++WHRRL
Sbjct: 365 GHAILFVGGTWKVTKGARVLAHGKKTGTLYMTSCPRDTIAVADASTDTSLWHRRL 419


>emb|CAN81130.1| hypothetical protein VITISV_003944 [Vitis vinifera]
          Length = 1236

 Score =  118 bits (296), Expect = 4e-25
 Identities = 60/115 (52%), Positives = 76/115 (66%), Gaps = 1/115 (0%)
 Frame = +2

Query: 2   NYTKGDLGTVFLGDDQPCDIVSKGDMHIKM-NGSSWLLRNVKYIPDLRKNLISVGQLASE 178
           NY  GD G V+L D    D+V  GD+ I + NGS WLL  V++IPDLR+NLISVGQL  E
Sbjct: 305 NYVAGDFGKVYLADGSALDVVGLGDVRISLPNGSVWLLEKVRHIPDLRRNLISVGQLDDE 364

Query: 179 EFVTVFTDNT*KVSKGSMVVANGKKDGTLYMTTHGCESIVVAHGKEDPNVWHRRL 343
               +F   T KV+KG+ V+A GKK GTLYMT+   ++I VA    D ++WHRRL
Sbjct: 365 GHAILFVGGTWKVTKGARVLARGKKTGTLYMTSCPRDTIAVADASTDTSLWHRRL 419


>emb|CAN71109.1| hypothetical protein VITISV_001479 [Vitis vinifera]
          Length = 1246

 Score =  118 bits (296), Expect = 4e-25
 Identities = 60/115 (52%), Positives = 76/115 (66%), Gaps = 1/115 (0%)
 Frame = +2

Query: 2   NYTKGDLGTVFLGDDQPCDIVSKGDMHIKM-NGSSWLLRNVKYIPDLRKNLISVGQLASE 178
           NY  GD G V+L D    D+V  GD+ I + NGS WLL  V++IPDLR+NLISVGQL  E
Sbjct: 277 NYVAGDFGKVYLADGSALDVVGLGDVRISLPNGSVWLLEKVRHIPDLRRNLISVGQLDDE 336

Query: 179 EFVTVFTDNT*KVSKGSMVVANGKKDGTLYMTTHGCESIVVAHGKEDPNVWHRRL 343
               +F   T KV+KG+ V+A GKK GTLYMT+   ++I VA    D ++WHRRL
Sbjct: 337 GHAILFVGGTWKVTKGARVLARGKKTGTLYMTSCPRDTIAVADASTDTSLWHRRL 391


>emb|CAN61548.1| hypothetical protein VITISV_043524 [Vitis vinifera]
          Length = 1535

 Score =  118 bits (296), Expect = 4e-25
 Identities = 60/115 (52%), Positives = 76/115 (66%), Gaps = 1/115 (0%)
 Frame = +2

Query: 2   NYTKGDLGTVFLGDDQPCDIVSKGDMHIKM-NGSSWLLRNVKYIPDLRKNLISVGQLASE 178
           NY  GD G V+L D    D+V  GD+ I + NGS WLL  V++IPDLR+NLISVGQL  E
Sbjct: 572 NYVAGDFGKVYLADGSXLDVVGLGDVRISLPNGSVWLLEKVRHIPDLRRNLISVGQLDDE 631

Query: 179 EFVTVFTDNT*KVSKGSMVVANGKKDGTLYMTTHGCESIVVAHGKEDPNVWHRRL 343
               +F   T KV+KG+ V+A GKK GTLYMT+   ++I VA    D ++WHRRL
Sbjct: 632 GHAILFVGGTWKVTKGARVLARGKKTGTLYMTSCPRDTIAVADASTDTSLWHRRL 686


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