BLASTX nr result

ID: Coptis24_contig00027693 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027693
         (546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274303.1| PREDICTED: ABC transporter A family member 7...   224   7e-57
ref|XP_004138156.1| PREDICTED: ABC transporter A family member 7...   211   8e-53
ref|XP_002511544.1| abc transporter, putative [Ricinus communis]...   209   2e-52
ref|XP_003523037.1| PREDICTED: ABC transporter A family member 7...   195   3e-48
emb|CBI15253.3| unnamed protein product [Vitis vinifera]              192   3e-47

>ref|XP_002274303.1| PREDICTED: ABC transporter A family member 7 [Vitis vinifera]
          Length = 949

 Score =  224 bits (571), Expect = 7e-57
 Identities = 113/189 (59%), Positives = 135/189 (71%), Gaps = 8/189 (4%)
 Frame = +3

Query: 3   STHGPASFMTQANALLRKNITFQKRNLKTNLGLVAFPXXXXXXXXXXXXXXNNELDKASN 182
           S+ GPASF TQANALLRKN+TFQKRN++TN+ LV+FP              N+ELDKA N
Sbjct: 4   SSSGPASFWTQANALLRKNLTFQKRNIRTNIRLVSFPILLCVLLVVIQKLVNSELDKAEN 63

Query: 183 KCGCACVDRNGDGTCEEVCGIEYSSLDQVGTCPIPHPPEWPALLQVPRPEYRAVRTD--- 353
           KCGC  V  N +G  E+ CGI+YS+LDQVGTCPIP PPEWPALLQVP PEYRAVR D   
Sbjct: 64  KCGCISVT-NENGQTEKRCGIQYSTLDQVGTCPIPSPPEWPALLQVPAPEYRAVRADFIQ 122

Query: 354 -----DESCRRTGSCPATIMFTGGNQSLGESLTANFFSGGFSPNTSDVLNAFANIPLGSD 518
                D+SCRRTGSCPATI+FTG N+SLG +L  N FS   S N+S++L   +N  LGS+
Sbjct: 123 FTDLPDDSCRRTGSCPATILFTGNNRSLGLTLAGNMFSSSSSLNSSNILGNLSNFVLGSE 182

Query: 519 TYTELTNFI 545
           +  E TNF+
Sbjct: 183 SMPETTNFL 191


>ref|XP_004138156.1| PREDICTED: ABC transporter A family member 7-like [Cucumis sativus]
           gi|449477292|ref|XP_004154983.1| PREDICTED: ABC
           transporter A family member 7-like [Cucumis sativus]
          Length = 947

 Score =  211 bits (536), Expect = 8e-53
 Identities = 97/186 (52%), Positives = 131/186 (70%), Gaps = 8/186 (4%)
 Frame = +3

Query: 12  GPASFMTQANALLRKNITFQKRNLKTNLGLVAFPXXXXXXXXXXXXXXNNELDKASNKCG 191
           GPASF TQANALLRKN+T+QKRN+  N+ L+ FP              +NELDK   +CG
Sbjct: 7   GPASFWTQANALLRKNLTYQKRNMNANVRLILFPFLLCLLLVLIQSLVDNELDKPKFRCG 66

Query: 192 CACVDRNGDGTCEEVCGIEYSSLDQVGTCPIPHPPEWPALLQVPRPEYRAVRTD------ 353
           CAC+D NGDG CEEVCG+++S+LDQ  +CPI +PPEWP LLQ+P PE+RAVR +      
Sbjct: 67  CACIDTNGDGRCEEVCGVQFSTLDQASSCPIENPPEWPPLLQMPAPEFRAVRNNFNPFND 126

Query: 354 --DESCRRTGSCPATIMFTGGNQSLGESLTANFFSGGFSPNTSDVLNAFANIPLGSDTYT 527
             DESCR+TG+CPAT++FTG N++LGE+L  + F+  F+ N+++V +  A   +GS + T
Sbjct: 127 LPDESCRQTGTCPATVLFTGTNRTLGETLAGSLFTNSFNLNSNNVSDGIAFNAVGSSSMT 186

Query: 528 ELTNFI 545
           E  NF+
Sbjct: 187 ENNNFL 192


>ref|XP_002511544.1| abc transporter, putative [Ricinus communis]
           gi|223550659|gb|EEF52146.1| abc transporter, putative
           [Ricinus communis]
          Length = 984

 Score =  209 bits (533), Expect = 2e-52
 Identities = 102/189 (53%), Positives = 128/189 (67%), Gaps = 8/189 (4%)
 Frame = +3

Query: 3   STHGPASFMTQANALLRKNITFQKRNLKTNLGLVAFPXXXXXXXXXXXXXXNNELDKASN 182
           S+HGPA+F  QA+ALLRKN+TFQKRN+KTN  L+ FP              + EL+K S 
Sbjct: 42  SSHGPATFWNQADALLRKNLTFQKRNVKTNCRLIFFPFVLCVLLVITQNLLDRELNKPSR 101

Query: 183 KCGCACVDRNGDGTCEEVCGIEYSSLDQVGTCPIPHPPEWPALLQVPRPEYRAVRTD--- 353
           KCGC  +D +GDG  E+VCG++YS+LDQV TC IP PP+WP LLQVP P YRAV +D   
Sbjct: 102 KCGCVDIDTDGDGRLEKVCGLQYSTLDQVATCAIPSPPQWPPLLQVPAPHYRAVSSDVIP 161

Query: 354 -----DESCRRTGSCPATIMFTGGNQSLGESLTANFFSGGFSPNTSDVLNAFANIPLGSD 518
                ++SCR TGSCP T++ TG NQSLGESL  N F   F+ N+S+V++  AN  LGSD
Sbjct: 162 FTDLPNDSCRSTGSCPVTVLVTGNNQSLGESLAGNMFPSAFTLNSSNVVDIVANSVLGSD 221

Query: 519 TYTELTNFI 545
           T  E  NF+
Sbjct: 222 TEPERDNFL 230


>ref|XP_003523037.1| PREDICTED: ABC transporter A family member 7-like [Glycine max]
          Length = 949

 Score =  195 bits (496), Expect = 3e-48
 Identities = 99/186 (53%), Positives = 121/186 (65%), Gaps = 9/186 (4%)
 Frame = +3

Query: 15  PASFMTQANALLRKNITFQKRNLKTNLGLVAFPXXXXXXXXXXXXXXNNELDKASNKCGC 194
           PASF TQANALLRKN+TFQKRN+KTN+GL+  P                +LDKA NKCGC
Sbjct: 10  PASFWTQANALLRKNLTFQKRNVKTNVGLILSPFILCLLLVLLQRLLEYQLDKAENKCGC 69

Query: 195 ACVDRNGDGTCEEVCGIEYSSLDQVGTCPIPHPPEWPALLQVPRPEYRAVRTD------- 353
            CV R GD   EE CGIE+S LDQ  TCPIP PPEWP LLQVP P+YRAVRTD       
Sbjct: 70  VCVRRQGDTCLEEECGIEHSDLDQFATCPIPSPPEWPPLLQVPAPQYRAVRTDYFPFSDF 129

Query: 354 -DESCRRTGSCPATIMFTGGNQSLGESLTANFFSGGFSP-NTSDVLNAFANIPLGSDTYT 527
            + SCR+ GSCP T++FTG NQS GE ++ N      S   +SD++ + A+  +GS++  
Sbjct: 130 PNTSCRKNGSCPVTMLFTGTNQSFGEIISRNMIPSTLSTIYSSDIMASLASNVVGSESEP 189

Query: 528 ELTNFI 545
             TNF+
Sbjct: 190 GNTNFL 195


>emb|CBI15253.3| unnamed protein product [Vitis vinifera]
          Length = 928

 Score =  192 bits (488), Expect = 3e-47
 Identities = 101/189 (53%), Positives = 119/189 (62%), Gaps = 8/189 (4%)
 Frame = +3

Query: 3   STHGPASFMTQANALLRKNITFQKRNLKTNLGLVAFPXXXXXXXXXXXXXXNNELDKASN 182
           S+ GPASF TQANALLRKN+TFQKRN++TN+ LV+FP              N+ELDKA N
Sbjct: 4   SSSGPASFWTQANALLRKNLTFQKRNIRTNIRLVSFPILLCVLLVVIQKLVNSELDKAEN 63

Query: 183 KCGCACVDRNGDGTCEEVCGIEYSSLDQVGTCPIPHPPEWPALLQVPRPEYRAVRTD--- 353
           KCGC                        VGTCPIP PPEWPALLQVP PEYRAVR D   
Sbjct: 64  KCGCI----------------------SVGTCPIPSPPEWPALLQVPAPEYRAVRADFIQ 101

Query: 354 -----DESCRRTGSCPATIMFTGGNQSLGESLTANFFSGGFSPNTSDVLNAFANIPLGSD 518
                D+SCRRTGSCPATI+FTG N+SLG +L  N FS   S N+S++L   +N  LGS+
Sbjct: 102 FTDLPDDSCRRTGSCPATILFTGNNRSLGLTLAGNMFSSSSSLNSSNILGNLSNFVLGSE 161

Query: 519 TYTELTNFI 545
           +  E TNF+
Sbjct: 162 SMPETTNFL 170


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