BLASTX nr result

ID: Coptis24_contig00027648 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027648
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267624.1| PREDICTED: ATPase family gene 2 protein-like...   211   7e-53
ref|XP_002330900.1| predicted protein [Populus trichocarpa] gi|2...   198   4e-49
ref|XP_002313465.1| predicted protein [Populus trichocarpa] gi|2...   196   2e-48
ref|XP_002512196.1| ATP binding protein, putative [Ricinus commu...   192   3e-47
ref|XP_003531459.1| PREDICTED: uncharacterized protein LOC100783...   191   5e-47

>ref|XP_002267624.1| PREDICTED: ATPase family gene 2 protein-like [Vitis vinifera]
          Length = 516

 Score =  211 bits (536), Expect = 7e-53
 Identities = 97/106 (91%), Positives = 104/106 (98%)
 Frame = -3

Query: 318 SRERRLFTNNGHGSYESGWVSVPFRHPSTFDTLALEPELKEQLTEDLTAFANGKEFYHRV 139
           SRERRLFTNNGHGSYESGWVSVPFRHPSTF+TLALEP+L++Q+T+DLTAFANGKEFYHRV
Sbjct: 162 SRERRLFTNNGHGSYESGWVSVPFRHPSTFETLALEPQLRQQITDDLTAFANGKEFYHRV 221

Query: 138 GRAWKRGYLLYGPPGSGKSSLIAAMANFTCYDVYDLELTKCSDNSE 1
           GRAWKRGYLLYGPPGSGKSSLIAAMAN+ CYDVYDLELTK SDNSE
Sbjct: 222 GRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELTKVSDNSE 267


>ref|XP_002330900.1| predicted protein [Populus trichocarpa] gi|222872722|gb|EEF09853.1|
           predicted protein [Populus trichocarpa]
          Length = 362

 Score =  198 bits (503), Expect = 4e-49
 Identities = 92/106 (86%), Positives = 100/106 (94%)
 Frame = -3

Query: 318 SRERRLFTNNGHGSYESGWVSVPFRHPSTFDTLALEPELKEQLTEDLTAFANGKEFYHRV 139
           SRERRLFTNNG+ SYESGWVSVPFRHPSTF+TLALEP LK+Q+ EDL AFA+G+EFYHRV
Sbjct: 76  SRERRLFTNNGNASYESGWVSVPFRHPSTFETLALEPHLKKQMMEDLKAFASGREFYHRV 135

Query: 138 GRAWKRGYLLYGPPGSGKSSLIAAMANFTCYDVYDLELTKCSDNSE 1
           GRAWKRGYLLYGPPGSGKSSLIAAMAN+ CYDVYDLELTK +DNSE
Sbjct: 136 GRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELTKVTDNSE 181


>ref|XP_002313465.1| predicted protein [Populus trichocarpa] gi|222849873|gb|EEE87420.1|
           predicted protein [Populus trichocarpa]
          Length = 432

 Score =  196 bits (498), Expect = 2e-48
 Identities = 90/106 (84%), Positives = 100/106 (94%)
 Frame = -3

Query: 318 SRERRLFTNNGHGSYESGWVSVPFRHPSTFDTLALEPELKEQLTEDLTAFANGKEFYHRV 139
           SRERRLFTNNG+ SYESGWVSVPFRHPSTF+TLALEP+LK Q+ EDL AFA+G+E+YHRV
Sbjct: 143 SRERRLFTNNGNASYESGWVSVPFRHPSTFETLALEPQLKRQIMEDLKAFASGREYYHRV 202

Query: 138 GRAWKRGYLLYGPPGSGKSSLIAAMANFTCYDVYDLELTKCSDNSE 1
           GRAWKRGYLLYGPPGSGKSSLIAAMAN+ CYDVYDLELTK +DNS+
Sbjct: 203 GRAWKRGYLLYGPPGSGKSSLIAAMANYLCYDVYDLELTKVTDNSD 248


>ref|XP_002512196.1| ATP binding protein, putative [Ricinus communis]
           gi|223548740|gb|EEF50230.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 517

 Score =  192 bits (487), Expect = 3e-47
 Identities = 89/106 (83%), Positives = 99/106 (93%)
 Frame = -3

Query: 318 SRERRLFTNNGHGSYESGWVSVPFRHPSTFDTLALEPELKEQLTEDLTAFANGKEFYHRV 139
           SRERRLFTNNG+ S+ESGWVSVPFRHPSTF+TLALEP+LK+Q+  DL AF+NGK FYHRV
Sbjct: 165 SRERRLFTNNGNASHESGWVSVPFRHPSTFETLALEPQLKKQIMGDLKAFSNGKAFYHRV 224

Query: 138 GRAWKRGYLLYGPPGSGKSSLIAAMANFTCYDVYDLELTKCSDNSE 1
           GRAWKRGYLL+GPPGSGKSSLIAAMAN+ CYDVYDLELTK +DNSE
Sbjct: 225 GRAWKRGYLLHGPPGSGKSSLIAAMANYLCYDVYDLELTKVTDNSE 270


>ref|XP_003531459.1| PREDICTED: uncharacterized protein LOC100783574 [Glycine max]
          Length = 516

 Score =  191 bits (485), Expect = 5e-47
 Identities = 93/108 (86%), Positives = 99/108 (91%), Gaps = 2/108 (1%)
 Frame = -3

Query: 318 SRERRLFTNN--GHGSYESGWVSVPFRHPSTFDTLALEPELKEQLTEDLTAFANGKEFYH 145
           SRERRLFTNN    GS+ESGWVSVPFRHPSTF+TLALEPELK+Q+  DLTAFA+GKEFY 
Sbjct: 164 SRERRLFTNNTTASGSFESGWVSVPFRHPSTFETLALEPELKKQIKNDLTAFADGKEFYK 223

Query: 144 RVGRAWKRGYLLYGPPGSGKSSLIAAMANFTCYDVYDLELTKCSDNSE 1
           RVGRAWKRGYLL+GPPGSGKSSLIAAMANF CYDVYDLELTK SDNSE
Sbjct: 224 RVGRAWKRGYLLHGPPGSGKSSLIAAMANFLCYDVYDLELTKVSDNSE 271


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